Rv0529 - c.408G>C
Drug resistance types
1 Sensitive
1 RR-TB
13 HR-TB
4 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 2 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.9 | 13 |
| lineage2.1;lineage4.9 | 4 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 7 |
| 14 | |
| La3 | 1 |
| lineage4.9;lineage6.3 | 5 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La3;lineage4.9 | 3 |
| lineage2.1 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.2.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.8 | 1 |
| lineage2.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786617 | Other | lineage4.1.1.1 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR28119777 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR25827682 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR4407463 | HR-TB | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4797201 | Other | None | ERR4800341 | Other | None | SRR26159043 | Other | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR4811075 | Other | None | SRR29093909 | Other | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR9117721 | HR-TB | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4811105 | HR-TB | None | ERR4811142 | RR-TB | None | ERR9787139 | Other | lineage6.3.1 | None | ERR11466174 | Other | lineage4.8 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR29096541 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | ERR13267017 | Pre-XDR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4810741 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR28119753 | Other | lineage4.9 | None |
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