lineage | Count |
---|---|
lineage2.2.1 | 5 |
5 | |
lineage2.1;lineage4.9;lineage7 | 1 |
La3;lineage2.1;lineage6.3 | 1 |
lineage4.9 | 8 |
lineage2.1 | 2 |
lineage2.1;lineage4.9 | 2 |
lineage4.3.3 | 1 |
lineage4.1.1.2 | 1 |
lineage2.1;lineage4.3.2;lineage4.9 | 1 |
La1;lineage4.9 | 1 |
La3 | 2 |
La1;lineage4.1.2 | 1 |
lineage2.2.1.1 | 2 |
La3;lineage2 | 1 |
La3;M.canetti;lineage2.2.1 | 1 |
M.canetti;lineage2.1;lineage4.9 | 1 |
lineage2.2 | 1 |
lineage4.9;lineage7 | 1 |
lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 39 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR25515554 | Other | lineage2.2.1 | None |
SRR1184372 | MDR-TB | None | |
SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
ERR387051 | Other | lineage4.9 | None |
SRR1710057 | Other | lineage2.1 | None |
SRR1175074 | Other | None | |
SRR1184388 | Other | lineage2.1;lineage4.9 | None |
SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None |
SRR18003019 | Other | lineage2.2.1 | None |
SRR1196494 | MDR-TB | None | |
SRR1184312 | Other | lineage2.2.1 | None |
ERR4818252 | Sensitive | lineage4.1.1.2 | None |
SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None |
SRR10808805 | Other | La1;lineage4.9 | None |
SRR1172728 | RR-TB | La3 | None |
SRR1172817 | Other | La3 | None |
SRR1173400 | Other | lineage4.9 | None |
SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
SRR26937107 | MDR-TB | lineage2.2.1 | None |
SRR1180147 | Other | lineage2.2.1.1 | None |
SRR1183144 | Other | lineage2.2.1 | None |
SRR1184294 | Other | lineage4.9 | None |
SRR1172951 | Other | lineage4.9 | None |
SRR1196768 | MDR-TB | None | |
SRR20969677 | HR-TB | La3;lineage2 | None |
ERR1063846 | HR-TB | lineage4.9 | None |
SRR1196546 | Other | lineage4.9 | None |
SRR1196566 | Other | lineage4.9 | None |
SRR1196583 | Other | lineage4.9 | None |
SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
SRR3416776 | Other | lineage2.1 | None |
SRR1196677 | Other | lineage2.2 | None |
SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
SRR1184380 | Other | lineage2.1;lineage4.9 | None |
SRR1184346 | HR-TB | lineage3.1 | None |
SRR1183106 | RR-TB | lineage2.2.1.1 | None |
SRR1184381 | MDR-TB | None |