lineage | Count |
---|---|
lineage2.2.1 | 15 |
lineage3 | 4 |
lineage4.1.3 | 2 |
7 | |
lineage4.1.2.1 | 2 |
lineage4 | 3 |
lineage4.3.4.2.1 | 3 |
lineage4.2.2.2 | 1 |
lineage4.9 | 12 |
lineage4.4.1.1 | 3 |
lineage4.1.1.3 | 1 |
La1.8.1 | 3 |
La1.3 | 5 |
lineage4.9;La1.3 | 2 |
lineage2.2.2 | 2 |
La1 | 1 |
lineage3.1.1 | 1 |
lineage4.2.1 | 1 |
lineage4.4.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1.4 | 1 |
lineage4.3.3 | 1 |
lineage4.8 | 2 |
lineage4;lineage2 | 1 |
spoligotype | Count |
---|---|
None | 75 |
ID | Drug resistance | Lineage | Country iso2 | SRR6832461 | MDR-TB | lineage2.2.1 | None | ERR2513259 | Other | lineage3 | None | SRR5535774 | MDR-TB | lineage4.1.3 | None | SRR6045399 | Other | None | ERR4830898 | MDR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2516561 | MDR-TB | lineage4 | nl | SRR5535835 | MDR-TB | lineage4.3.4.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044838 | Other | lineage4.9 | None | ERR4831944 | MDR-TB | lineage2.2.1 | vn | ERR502470 | RR-TB | lineage4.9 | None | ERR4831025 | Pre-XDR-TB | lineage3 | np | SRR6896383 | RR-TB | lineage4.4.1.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7517788 | MDR-TB | lineage4.1.3 | ci | DRR184906 | MDR-TB | lineage2.2.1 | vn | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4553562 | MDR-TB | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4423751 | MDR-TB | lineage4.3.4.2.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4423752 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769516 | Other | La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR5864888 | MDR-TB | lineage2.2.1 | None | ERR5864890 | MDR-TB | lineage2.2.1 | None | SRR13423559 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR7737684 | MDR-TB | lineage2.2.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR10397210 | MDR-TB | lineage2.2.1 | None | ERR5864889 | MDR-TB | lineage2.2.1 | None | SRR13423557 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR1642937 | RR-TB | lineage4.1.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21277268 | RR-TB | lineage2.2.1.1 | None | ERR3148149 | RR-TB | lineage4.1.4 | None | SRR22528534 | MDR-TB | lineage4.3.3 | None | ERR11081515 | MDR-TB | lineage2.2.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR5485485 | MDR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR176751 | HR-TB | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR212121 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR4816762 | Other | lineage4;lineage2 | None |
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