lineage | Count |
---|---|
lineage4.9 | 4 |
La1.2 | 1 |
lineage2.2.1 | 4 |
lineage4.4.1.1 | 1 |
lineage3;lineage4 | 1 |
lineage4.1.2.1 | 2 |
La1.3 | 1 |
lineage3 | 2 |
lineage4.8 | 2 |
lineage4.3.4.1 | 2 |
lineage3.1.2.1 | 1 |
lineage4.3.4.2 | 1 |
lineage5 | 1 |
spoligotype | Count |
---|---|
None | 23 |
ID | Drug resistance | Lineage | Country iso2 | SRR1735598 | RR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR6046839 | Other | lineage4.9 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4769495 | Other | La1.3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR4814748 | Other | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4820266 | Sensitive | lineage3 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4816967 | Other | lineage5 | None |
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