lineage | Count |
---|---|
lineage1.2.1.1 | 1 |
lineage4.1 | 1 |
49 | |
lineage3.1.2.2 | 1 |
lineage4 | 24 |
lineage3.1 | 2 |
lineage2.2.1 | 2 |
lineage4.1.2.1 | 4 |
lineage1.1 | 1 |
lineage2.2 | 1 |
lineage4.9 | 5 |
lineage4.3.3 | 2 |
lineage1.1.3.1 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.5 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 97 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4816050 | HR-TB | lineage3.1.2.2 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675383 | HR-TB | None | ERR2693239 | HR-TB | None | SRR3675558 | HR-TB | None | SRR5341303 | RR-TB | lineage4 | None | SRR3675571 | HR-TB | None | SRR6045892 | Sensitive | None | ERR278594 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR294248 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323041 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283028 | Other | None | ERR323115 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283031 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR4769521 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR6358837 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6866410 | Sensitive | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR8976043 | HR-TB | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | ERR9119096 | Other | lineage4.3.3 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | ERR9634265 | Sensitive | None | SRR1172234 | Other | None | SRR1196768 | MDR-TB | None | SRR13861376 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR24222956 | Sensitive | lineage3 | None | SRR13861484 | RR-TB | lineage4.9 | None |
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