Rv0676c - c.2583G>A


Drug resistance types
11 Sensitive 6 RR-TB 42 HR-TB 35 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 15 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 22
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9 13
La2;lineage4.9 1
M.canetti;lineage2.2 1
La3;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage3 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.9 5
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.7;lineage4.9 2
La1;lineage2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.2.1.1 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
lineage2.2.1 2
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 2
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.3.1 1
lineage1.1.2 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.3.3 2
lineage1.1 1
M.canetti;lineage2.1 1
lineage4 1
La3;lineage4 1
spoligotype Counts
spoligotype Count
None 110
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046492 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR24222956 Sensitive lineage3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR8665994 Other lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR473332 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29356811 Other lineage3 None
SRR6044815 Other lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2693252 Sensitive lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR13291101 Sensitive lineage2.2.1 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR13285068 Sensitive lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR28045620 Sensitive lineage1.1.2 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR5908228 RR-TB lineage4.3.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR9119096 RR-TB lineage4.3.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR28351339 MDR-TB lineage4 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283028 Other La3;lineage4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None