Rv1630 - c.910_912delTTGinsCC
Drug resistance types
14 Sensitive
33 RR-TB
21 HR-TB
19 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 6 |
| lineage4.1.1.3 | 2 |
| lineage4.9 | 42 |
| lineage4.3.2.1 | 3 |
| lineage3 | 10 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1 | 11 |
| lineage4.6.1.2 | 4 |
| lineage4.8 | 9 |
| lineage4.3.3 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3.1.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.5 | 1 |
| lineage1.2.2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 125 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4815079 | RR-TB | lineage3 | None | SRR6046376 | Other | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4821276 | Sensitive | lineage3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1173770 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR6044780 | Sensitive | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR9786076 | Other | lineage3 | None | SRR11462861 | Other | La1.8.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4816548 | HR-TB | lineage4.5 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR751345 | Other | lineage5.1.1 | None | SRR1140716 | Other | lineage3 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4819546 | HR-TB | lineage3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR16278274 | Other | La1.4 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None |
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