lineage | Count |
---|---|
lineage4 | 22 |
53 | |
La1 | 1 |
lineage2.2 | 2 |
lineage4.9 | 12 |
lineage2.2.1.1 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage3 | 1 |
lineage4.1 | 1 |
lineage4.9;La1.3 | 1 |
La1.2 | 1 |
La1.3 | 1 |
spoligotype | Count |
---|---|
None | 98 |
ID | Drug resistance | Lineage | Country iso2 | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4798431 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811493 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR702406 | HR-TB | None | ERR6866639 | Other | None | ERR736839 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR10808805 | Sensitive | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR17658565 | Other | lineage3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675456 | HR-TB | None | SRR3675234 | Other | None | SRR3675270 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4818929 | HR-TB | None | SRR5341453 | Sensitive | None | SRR5341300 | Other | lineage4 | None | ERR2693257 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341467 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045555 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | SRR6046492 | Other | None | SRR6046644 | HR-TB | None | ERR4831117 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1035122 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4024991 | Other | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4188247 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769552 | Other | La1.3 | None |
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