lineage | Count |
---|---|
48 | |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage2.2.1 | 4 |
lineage4;lineage1.1 | 1 |
lineage3 | 2 |
lineage4.1.2.1 | 4 |
lineage1.1 | 1 |
lineage5.2 | 2 |
lineage3.1 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.9 | 5 |
La1.8.1 | 2 |
lineage4 | 1 |
lineage4.3.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | ERR1035239 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675482 | HR-TB | None | SRR3675550 | Other | None | SRR3675383 | HR-TB | None | SRR3675502 | Other | None | SRR3675545 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR3675558 | HR-TB | None | ERR1035162 | Other | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR3275220 | Other | lineage3 | nl | SRR5341418 | Other | None | ERR2446144 | Other | lineage3 | nl | ERR2693239 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6325444 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046460 | HR-TB | None | ERR5311090 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR294248 | HR-TB | None | ERR502889 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323041 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR5311099 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3439432 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR4798406 | HR-TB | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | SRR13861372 | Other | lineage4.9 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | ERR9896147 | Sensitive | lineage2.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837630 | Sensitive | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None |
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