EBG00000313325 - n.152T>C
Drug resistance types
8 Sensitive
8 RR-TB
10 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 7 |
| lineage4.1.2.1 | 2 |
| lineage4.9 | 10 |
| lineage4.1.1.3 | 4 |
| lineage4.3.3 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.2.1 | 1 |
| La1.3 | 1 |
| lineage6.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4818904 | Other | lineage4.8 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4769453 | Other | La1.3 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR17333998 | Sensitive | lineage4.1.1.3 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR11465776 | Sensitive | lineage4.1.1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None |
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