lineage | Count |
---|---|
lineage4.8 | 37 |
lineage2;lineage4 | 1 |
lineage3.1.2;lineage4.1.1.3.1 | 1 |
lineage3 | 3 |
lineage4.8;lineage4.9 | 1 |
lineage1.1.3.2 | 1 |
lineage4.4.1.2 | 1 |
lineage4.1.1.3 | 2 |
lineage2.2.1 | 5 |
lineage2.2.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.9 | 1 |
lineage4.2.1.1 | 1 |
lineage2.2.1;lineage4.5 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 59 |
ID | Drug resistance | Lineage | Country iso2 | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR978754 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR978693 | Other | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR2229366 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR017781 | Other | lineage3 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR28859781 | Sensitive | lineage3 | None | ERR978752 | Other | lineage4.8 | None | ERR4828879 | HR-TB | lineage3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR2228838 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR978747 | Other | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR1023509 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR4815816 | Other | lineage4.5 | gb | ERR5987263 | MDR-TB | lineage2.2.1 | None |
---|