EBG00000313325 - n.699C>T
Drug resistance types
31 Sensitive
0 RR-TB
4 HR-TB
12 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 3 |
| lineage4 | 2 |
| La1 | 1 |
| lineage4.8 | 1 |
| La1.8.1 | 5 |
| lineage4.9 | 16 |
| lineage3 | 7 |
| La1.2 | 4 |
| lineage3.1.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.6.1.2 | 3 |
| lineage2.2.1 | 10 |
| lineage4.3.4.2.1 | 3 |
| lineage4.2.2.1 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.1.2.1 | 3 |
| lineage6.1.1 | 1 |
| lineage2.2 | 1 |
| La1.6 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1 | 2 |
| lineage1.1.2 | 1 |
| La1.7 | 1 |
| 1 | |
| lineage3.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.9.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1034765 | HR-TB | lineage4.3.3 | None | ERR1063855 | Other | lineage4 | None | ERR3283010 | Other | La1 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR3283009 | Other | La1.8.1 | None | ERR3283053 | Other | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283041 | Other | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3797024 | Other | lineage4.9 | None | ERR3439225 | Other | La1.8.1 | None | ERR3439268 | Sensitive | lineage4.9 | None | ERR3470691 | MDR-TB | lineage3 | None | ERR3470682 | Other | lineage3 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3797035 | Other | lineage4.9 | None | ERR473279 | Other | lineage4.9 | None | ERR4188280 | Other | La1.8.1 | None | ERR4769503 | Other | La1.2 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR4798422 | Sensitive | lineage3.1.2.1 | in | ERR4769512 | Sensitive | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR6197029 | Other | lineage4.7 | None | ERR6338285 | Other | La1.2 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR752034 | Sensitive | lineage2.2.1 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR7821103 | HR-TB | lineage1.1.3.2 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | ERR8665811 | Pre-XDR-TB | lineage2.2 | None | ERR9117684 | Sensitive | lineage3 | None | SRR10993953 | Other | La1.6 | None | SRR14801688 | Sensitive | lineage4.3.3 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR13199734 | Other | La1.2 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR14781887 | MDR-TB | lineage4.2.1 | None | SRR14782707 | Other | lineage2.2.1 | None | SRR18391760 | Other | La1.7.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR17111238 | Other | La1.7 | None | SRR18053779 | Other | La1.7.1 | None | SRR3675503 | Sensitive | lineage4.9 | None | SRR2100589 | Sensitive | lineage3 | None | ERR181733 | Sensitive | lineage4.3.4.2.1 | None | ERR176517 | Sensitive | lineage1.1.3.2 | None | SRR3675273 | Sensitive | lineage3 | None | ERR192070 | Other | None | SRR2100904 | MDR-TB | lineage4.6.1.2 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | ERR176690 | Sensitive | lineage4.3.4.2.1 | mw | ERR216901 | Other | lineage3.1.1 | None | ERR2512704 | Other | lineage4.3.2 | gb | ERR216928 | Other | lineage4.9.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR228235 | Sensitive | lineage3 | None | SRR5217421 | Sensitive | lineage2.2.1 | None | SRR5152936 | MDR-TB | lineage2.2.1 | None | ERR4820915 | Sensitive | lineage3 | gb | SRR5341295 | Sensitive | lineage1.2.2.2 | in | ERR11049338 | Sensitive | lineage4.1.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2747678 | Other | La1.8.1 | None | ERR278516 | MDR-TB | lineage4.6.1.2 | None | SRR6045989 | Other | lineage2.2.1 | gb | ERR4829874 | Sensitive | lineage4.1.2.1 | it | SRR6650411 | Sensitive | lineage1.1.3.1 | None | SRR998816 | MDR-TB | lineage4.1.3 | None | SRR8599999 | Other | La1.8.1 | None | SRR6153149 | Sensitive | lineage1.1.1.1 | ca | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | ERR323035 | Sensitive | lineage4.9 | None |
|---|
