EBG00000313339 - n.1212G>C
Drug resistance types
6 Sensitive
2 RR-TB
8 HR-TB
10 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 4 |
| lineage2.2.1 | 15 |
| lineage3.1.1 | 4 |
| lineage4.2.2.2 | 1 |
| lineage3.1.2 | 3 |
| lineage3 | 9 |
| lineage3.1.3 | 1 |
| lineage4.8 | 8 |
| lineage3.1 | 1 |
| lineage4.9 | 3 |
| lineage4.8.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage1.1.3.3 | 1 |
| lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| 4 | |
| lineage4.7 | 3 |
| lineage4.1.2 | 1 |
| lineage1.2.2.2 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.2.1 | 3 |
| lineage6.3.1 | 1 |
| La1.8.1 | 3 |
| La1.2 | 1 |
| La1.3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3 | 1 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045743 | Other | lineage3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR6045158 | Other | lineage4.9 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045164 | Other | lineage4.1.2.1 | None | SRR6046189 | Other | lineage4.8 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046208 | Other | lineage4 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045327 | HR-TB | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6045289 | Other | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046558 | Other | lineage3 | gb | SRR6046607 | Other | lineage3 | None | SRR6046716 | Other | lineage3 | gb | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046761 | Other | lineage3 | gb | SRR6046764 | Other | lineage4.2.2 | None | SRR6046790 | Other | lineage4.7 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6046891 | Other | lineage4.7 | None | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR6832659 | Other | lineage4.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7645900 | Sensitive | lineage4.8 | None | ERR133893 | Sensitive | lineage4.8 | ru | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4769503 | Other | La1.2 | None | ERR4627319 | Other | La1.8.1 | None | ERR4769479 | Other | La1.3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR5865993 | MDR-TB | lineage2.2.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117728 | Other | lineage3 | None | ERR5987447 | MDR-TB | lineage2.2.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117806 | Other | lineage4.8 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869160 | Sensitive | lineage2.2.1.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR11349137 | RR-TB | lineage4.4.1.1.1 | None | SRR1175073 | Other | lineage4.9 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR14088391 | Pre-XDR-TB | lineage3 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR1792265 | Other | La1.8.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR19304083 | Other | lineage4.4.1.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | SRR5067471 | Sensitive | lineage2.2.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007180 | Other | None | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046087 | Other | None |
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