EBG00000313339 - n.1271C>A
Drug resistance types
39 Sensitive
3 RR-TB
4 HR-TB
11 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 31 |
| lineage3 | 3 |
| lineage2.2.1.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.7 | 3 |
| lineage4.1.2.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage2.2.1 | 11 |
| lineage3.1.1 | 1 |
| lineage4 | 6 |
| lineage2.2.2 | 1 |
| 6 | |
| lineage1.1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage5.1.1 | 3 |
| lineage5.1.4 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.8 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.1.4 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1.3 | 1 |
| La1.3 | 1 |
| lineage4.3.3 | 1 |
| lineage1.2.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.6.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4820892 | Sensitive | lineage4.9 | None | SRR5341460 | Other | lineage3 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR6044871 | Sensitive | lineage3 | None | SRR6152854 | Other | lineage4.1.2.1 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | SRR6397568 | Other | lineage4.1.1 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR6397588 | Other | lineage2.2.1 | None | SRR5535931 | MDR-TB | lineage3.1.1 | None | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397441 | Other | lineage4 | None | SRR6152886 | HR-TB | lineage3 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6153036 | Other | None | SRR6152986 | Other | lineage2.2.1 | None | SRR6397642 | RR-TB | None | ERR502483 | Sensitive | lineage4.9 | None | SRR6397771 | Other | lineage1.1.1.1 | None | ERR502472 | Other | lineage4.6.2.2 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6397770 | Other | lineage4.7 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR4831742 | MDR-TB | lineage2.2.1 | vn | ERR502498 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4 | None | ERR019556 | Pre-XDR-TB | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502513 | Sensitive | lineage5.1.4 | gh | SRR6982510 | Sensitive | lineage4;lineage2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR036215 | Other | lineage4.8 | None | ERR1063855 | Other | lineage4 | None | ERR1023527 | RR-TB | lineage4 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR4187921 | Other | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR144568 | Pre-XDR-TB | None | ERR4024588 | Other | lineage4.1.1 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR4187995 | Other | La1.8.1 | None | ERR4423734 | MDR-TB | lineage4.1.1.3 | None | ERR4769428 | Other | La1.3 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR6359060 | MDR-TB | lineage4.7 | None | ERR702399 | Sensitive | lineage5.1.1 | gh | ERR736816 | Other | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | ERR8665609 | Pre-XDR-TB | lineage2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR10315684 | Pre-XDR-TB | lineage4.3.3 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1172808 | Other | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173025 | Other | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173705 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1181161 | Other | lineage4.9 | None | SRR1173717 | MDR-TB | lineage4.6.1 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR11972257 | Other | lineage4 | None | SRR124451 | HR-TB | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1184383 | Other | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR21676316 | Sensitive | lineage4.3.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR176771 | Sensitive | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR176470 | Other | lineage4.3.4.1 | mw |
|---|
