EBG00000313339 - n.1458A>C
Drug resistance types
31 Sensitive
1 RR-TB
0 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| La1.8.1 | 9 |
| lineage4.3.3 | 2 |
| La1.4 | 1 |
| lineage1.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.1 | 4 |
| lineage3 | 4 |
| lineage4.5 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.9 | 10 |
| lineage1.2.2.2 | 2 |
| lineage4.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.8 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4 | 1 |
| 1 | |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181319 | Other | lineage2.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR16278273 | Other | La1.4 | None | SRR12199469 | Sensitive | lineage1.1.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR17832798 | Other | lineage3 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR718384 | MDR-TB | lineage4.5 | th | ERR216950 | Other | lineage1.1.3.2 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR211997 | Sensitive | lineage3.1.1 | mw | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SRR5341430 | Other | lineage3 | None | SRR5341460 | Other | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR2653176 | MDR-TB | lineage4.3.3 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR4821551 | Sensitive | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6045614 | Other | lineage4.8 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR495008 | Sensitive | lineage4.4.1.1.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR8600071 | Other | La1.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR10796597 | Other | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR144568 | Pre-XDR-TB | None | ERR4188035 | Other | La1.8.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4769482 | Sensitive | La1 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None |
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