lineage | Count |
---|---|
lineage4.9 | 26 |
lineage4.2.2 | 70 |
lineage4.8 | 5 |
lineage4.4.1.1.1 | 2 |
lineage4.1.2.1 | 1 |
La1.7;lineage4.9 | 1 |
lineage4.8.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.1.1.1 | 1 |
lineage4.1.2 | 1 |
lineage4.6.1.2 | 1 |
lineage4.3.3 | 3 |
lineage2.2.1 | 3 |
lineage1.1.2 | 1 |
lineage3.1;lineage4 | 1 |
lineage1.1.2;lineage4.2.2 | 1 |
lineage4.2.2;lineage4.3.3 | 1 |
lineage2.2.1;lineage4.2.2 | 1 |
lineage4.6.2.2 | 1 |
lineage4.6.1.1 | 1 |
lineage4.2.1 | 1 |
lineage4.2;lineage4.9 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 126 |
ID | Drug resistance | Lineage | Country iso2 | SRR1180686 | Other | lineage4.9 | None | ERR114491 | Sensitive | lineage4.2.2 | None | SRR1182900 | Sensitive | lineage4.9 | None | SRR1182878 | Other | lineage4.9 | None | ERR4822455 | Sensitive | lineage4.2.2 | de | SRR25827386 | MDR-TB | lineage4.2.2 | None | ERR072053 | Sensitive | lineage4.2.2 | None | ERR4596938 | MDR-TB | lineage4.2.2 | None | SRR29440746 | Sensitive | lineage4.2.2 | None | SRR1181299 | Other | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1183548 | Other | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR30182569 | Sensitive | lineage4.2.2 | None | SRR1181569 | Other | lineage4.9 | None | SRR1181580 | Other | lineage4.9 | None | ERR4798796 | Sensitive | lineage4.2.2 | in | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180024 | Other | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1180087 | Other | lineage4.9 | None | ERR6359034 | Sensitive | lineage4.2.2 | None | SRR1183152 | Other | lineage4.9 | None | ERR1034688 | Pre-XDR-TB | lineage4.2.2 | in | SRR18213922 | Sensitive | lineage4.2.2 | None | SRR29231031 | Sensitive | lineage4.2.2 | None | ERR6359087 | Sensitive | lineage4.2.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4800664 | Sensitive | lineage4.2.2 | None | SRR5341253 | MDR-TB | lineage4.2.2 | in | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1183190 | Other | lineage4.9 | None | SRR1183281 | Other | lineage4.9 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR28044640 | Sensitive | lineage4.2.2 | None | ERR3275835 | Sensitive | lineage4.2.2 | nl | ERR4798568 | Pre-XDR-TB | lineage4.2.2 | in | ERR4822456 | Sensitive | lineage4.2.2 | de | SRR16058388 | HR-TB | lineage4.2.2 | None | ERR4797134 | Sensitive | lineage4.2.2 | in | SRR1180687 | Other | lineage4.9 | None | SRR1183684 | Other | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR18213938 | Sensitive | lineage4.2.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR21691110 | Sensitive | lineage4.2.2 | None | ERR6358886 | Sensitive | lineage4.6.1.2 | None | ERR13266427 | Sensitive | lineage4.2.2 | None | SRR29772463 | Pre-XDR-TB | lineage4.2.2 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR4800090 | Pre-XDR-TB | lineage4.2.2 | in | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR29231532 | Sensitive | lineage4.2.2 | None | ERR3078006 | MDR-TB | lineage4.2.2 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR017794 | Sensitive | lineage4.2.2 | None | SRR1181422 | Other | lineage4.9 | None | ERR405222 | Sensitive | lineage3.1;lineage4 | None | ERR13266496 | Sensitive | lineage4.2.2 | None | ERR019868 | Sensitive | lineage4.2.2 | None | SRR8380933 | HR-TB | lineage4.2.2 | in | SRR7131122 | Other | lineage2.2.1 | None | SRR22251082 | Sensitive | lineage4.2.2 | None | ERR2512399 | Sensitive | lineage4.2.2 | gb | SRR21732257 | Sensitive | lineage4.2.2 | None | ERR072049 | Sensitive | lineage4.2.2 | None | SRR28046077 | Other | lineage4.2.2 | None | SRR1183438 | Other | lineage4.9 | None | ERR4798856 | Sensitive | lineage4.2.2 | in | SRR22137400 | Sensitive | lineage4.2.2 | None | SRR1181264 | Sensitive | lineage4.9 | None | ERR1034791 | RR-TB | lineage4.9 | None | SRR7069057 | Sensitive | lineage4.2.2 | None | SRR1180094 | Other | lineage4.9 | None | SRR26056407 | Sensitive | lineage4.2.2 | None | SRR8380951 | Sensitive | lineage1.1.2;lineage4.2.2 | in | ERR473311 | Sensitive | lineage4.9 | None | ERR4816526 | Sensitive | lineage4.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR29231475 | Sensitive | lineage4.2.2;lineage4.3.3 | None | SRR29772776 | MDR-TB | lineage4.2.2 | None | ERR13261273 | Sensitive | lineage4.2.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR29441048 | Sensitive | lineage4.2.2 | None | ERR2512895 | Sensitive | lineage4.2.2 | gb | SRR25827442 | XDR-TB | lineage2.2.1;lineage4.2.2 | None | ERR13261277 | Other | lineage4.2.2 | None | SRR22249995 | Sensitive | lineage4.2.2 | None | ERR13260952 | Sensitive | lineage4.2.2 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR3105739 | Pre-XDR-TB | lineage4.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR9125273 | HR-TB | lineage4.2.2 | None | SRR1180047 | Other | lineage4.9 | None | ERR2446438 | Sensitive | lineage4.2.2 | nl | ERR13267096 | Pre-XDR-TB | lineage4.2.2 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR13266874 | Pre-XDR-TB | lineage4.2.2 | None | SRR2100338 | Sensitive | lineage4.2.2 | None | ERR4796795 | Pre-XDR-TB | lineage4.2.2 | in | SRR29440630 | Other | lineage4.2.2 | None | ERR13266719 | Pre-XDR-TB | lineage4.2.2 | None | SRR27450415 | Sensitive | lineage4.2.2 | None | ERR3275705 | Sensitive | lineage4.2.2 | nl | ERR4797587 | Pre-XDR-TB | lineage4.2.2 | in | ERR3078008 | MDR-TB | lineage4.6.1.1 | None | SRR1166181 | Sensitive | lineage4.2.1 | None | SRR5341372 | HR-TB | lineage4.2.2 | in | SRR28045589 | Sensitive | lineage4.2.2 | None | SRR1168955 | Sensitive | lineage4.2;lineage4.9 | None | ERR4820151 | Other | lineage4.8 | None | SRR28044879 | Sensitive | lineage4.2.2 | None | ERR4596896 | MDR-TB | lineage4.2.2 | None | SRR2100109 | Sensitive | lineage4.2.2 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | SRR22249804 | Sensitive | lineage4.2.2 | None | SRR1183531 | Other | lineage4.9 | None | SRR1182954 | Other | lineage4.9 | None | ERR11082859 | Sensitive | lineage4.2.2 | None | ERR4800126 | Sensitive | lineage4.2.2 | None | SRR30182608 | Sensitive | lineage4.2.2 | None |
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