TB-Profiler
Home
Upload
SRA data
Rv0005
- c.1578G>A
Drug resistance types
543 Sensitive
10 RR-TB
78 HR-TB
125 MDR-TB
104 Pre-XDR-TB
26 XDR-TB
89 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.3.4.2
955
lineage4.1.2.1;lineage4.3.4.2
3
La1.7;lineage4.9
3
lineage2.2.1;lineage4.3.4.2
3
lineage1.1.1.1
1
lineage4.3.4.2;lineage4.4.1.1
1
lineage1.2.1.2.1
1
lineage3.1.1;lineage4.3.4.2
1
lineage4.3.3;lineage4.3.4.2
1
lineage2.2.1
1
Showing 1 to 10 of 15 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
975
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR025456
Sensitive
lineage4.3.4.2
nl
ERR028629
Sensitive
lineage4.3.4.2
None
ERR045763
Sensitive
lineage4.3.4.2
None
ERR10219862
Sensitive
lineage4.3.4.2
None
ERR10219863
Sensitive
lineage4.3.4.2
None
ERR10219873
HR-TB
lineage4.3.4.2
None
ERR10219876
Other
lineage4.3.4.2
None
ERR1023470
Sensitive
lineage4.3.4.2
None
ERR1023508
Sensitive
lineage4.3.4.2
None
ERR1023525
HR-TB
La1.7;lineage4.9
None
Showing 1 to 10 of 975 entries
Previous
1
2
3
4
5
…
98
Next