Rv0006 - c.-779G>C
Drug resistance types
2 Sensitive
1 RR-TB
24 HR-TB
13 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 1 |
| lineage4.6.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.9 | 13 |
| lineage2.2.1 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage5.2 | 2 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage4.9 | 3 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 61 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4810624 | MDR-TB | lineage2.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR2660539 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR387051 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR28119753 | Other | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | ERR212001 | HR-TB | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None |
|---|
