Rv1630 - c.766_768delGACinsCG
Drug resistance types
10 Sensitive
50 RR-TB
12 HR-TB
19 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 19 |
| lineage2.2.2 | 4 |
| lineage4.3.2.1 | 3 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.3.3 | 3 |
| lineage3 | 9 |
| lineage4.8 | 30 |
| lineage4.1.2.1 | 4 |
| lineage4.3.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.9 | 20 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.6.1.2 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.1.1.1 | 4 |
| lineage4.2.1 | 3 |
| lineage1.1.3.1 | 1 |
| lineage1.2.2 | 2 |
| lineage3.1.2.1 | 5 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.3 | 1 |
| lineage2;lineage4 | 1 |
| lineage4 | 1 |
| 2 | |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.1.3 | 1 |
| La2 | 1 |
| lineage4.3.1.1 | 1 |
| lineage5 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.4.2 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 151 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816425 | Other | lineage2.2.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR4815079 | RR-TB | lineage3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR978767 | RR-TB | lineage4.8 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4815901 | Other | lineage2.2.2 | None | SRR1173281 | Other | lineage3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR978752 | Other | lineage4.8 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR5007165 | Other | lineage3 | None | SRR1180446 | Other | lineage4.9 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR2512986 | Other | lineage3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181256 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4818988 | Other | lineage1.2.2 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | ERR4815811 | Other | lineage4.2.1.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR4816093 | Other | lineage1.1.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820324 | Other | lineage4 | None | ERR108125 | RR-TB | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4817069 | RR-TB | None | ERR4817060 | Other | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4818556 | Sensitive | lineage3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR4820266 | Sensitive | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4815709 | Sensitive | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR4816967 | Other | lineage5 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR9119120 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4818522 | Other | lineage3 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821222 | Other | lineage4.3.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR3675552 | Other | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867575 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR978735 | Other | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815909 | Other | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None |
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