ERR4796644
|
Sensitive
|
lineage1.1.2
|
in
|
ERR4797075
|
HR-TB
|
lineage1.1.2
|
in
|
ERR4798821
|
Sensitive
|
lineage1.1.2
|
in
|
ERR13273247
|
Other
|
lineage2.2.1
|
None
|
ERR4817517
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
ERR13284163
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5865196
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2516801
|
MDR-TB
|
lineage1.1.2;lineage2.2.1
|
gb
|
ERR4797404
|
Sensitive
|
lineage1.1.2
|
in
|
SRR5152951
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13261518
|
Sensitive
|
lineage1.1.2
|
None
|
SRR23861752
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22250067
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4821912
|
Sensitive
|
lineage1.1.2
|
None
|
SRR12882615
|
Sensitive
|
lineage1.1.2
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR386927
|
Sensitive
|
lineage1.1.2
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR5865488
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798387
|
Other
|
lineage1.1.2
|
in
|
ERR7975680
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675507
|
Other
|
lineage4.9
|
None
|
SRR998858
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7070409
|
Sensitive
|
lineage1.1.2
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR13284778
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13276287
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR11044576
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11786875
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830046
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
SRR19977735
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR5865197
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796759
|
Sensitive
|
lineage1.1.2
|
in
|
SRR2101014
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1163221
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4799376
|
Sensitive
|
lineage1.1.2
|
in
|
ERR11798600
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13291658
|
Sensitive
|
lineage1.1.2
|
None
|
ERR552474
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10430391
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1162740
|
Other
|
lineage4.1.2.1
|
None
|
SRR6256977
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR11067298
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3639712
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR2100169
|
Sensitive
|
lineage1.1.2
|
None
|
ERR13276126
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4800530
|
MDR-TB
|
lineage1.1.2
|
in
|
ERR5917685
|
HR-TB
|
lineage2.2.1
|
by
|
ERR11080909
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797414
|
HR-TB
|
lineage1.1.2
|
in
|
SRR1181109
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21659830
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797198
|
Sensitive
|
lineage1.1.2
|
in
|
ERR5865194
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13276157
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1159029
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29681249
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16058374
|
Sensitive
|
lineage1.1.2
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR117703
|
Sensitive
|
lineage1.1.2
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR9119138
|
RR-TB
|
M.canetti;lineage4.3.1;lineage4.9
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
ERR4827988
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR234620
|
HR-TB
|
lineage2.2.1
|
ru
|
ERR4827514
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
ERR4798652
|
Sensitive
|
lineage1.1.2
|
in
|
SRR19977731
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR9125658
|
Sensitive
|
lineage1.1.2
|
None
|
ERR3639793
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6257106
|
HR-TB
|
lineage2.2.1
|
ru
|
SRR13423544
|
Other
|
lineage4.5
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR403241
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11081998
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR19977732
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR23310950
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710079
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR11080912
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551478
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29231412
|
RR-TB
|
lineage1.1.2
|
None
|
ERR5865489
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865195
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8773954
|
Other
|
lineage2.2.1
|
None
|
ERR4797411
|
Sensitive
|
lineage1.1.2
|
in
|
SRR28498674
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832427
|
HR-TB
|
lineage2.2.1
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR10303353
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798716
|
Sensitive
|
lineage1.1.2
|
in
|
ERR4799013
|
HR-TB
|
lineage1.1.2;lineage3
|
in
|
ERR4799889
|
Sensitive
|
lineage1.1.2;lineage1.2.2.2
|
in
|
SRR14781918
|
HR-TB
|
lineage2.2.1
|
None
|
SRR14782416
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11773780
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13285169
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10430400
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR11044531
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29539163
|
HR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
ERR11082305
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822373
|
Pre-XDR-TB
|
lineage2.2.1
|
kg
|
SRR29539730
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5865193
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6044815
|
Other
|
lineage4.9
|
None
|
SRR28706521
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9119127
|
Sensitive
|
lineage1.1.2
|
None
|
SAMEA2533971
|
MDR-TB
|
lineage2.2.1
|
uz
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR3675545
|
Other
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR11043991
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28409427
|
Sensitive
|
lineage1.1.2
|
None
|
SRR23340159
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR356389
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR4799981
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4814849
|
MDR-TB
|
lineage2.2.1
|
gb
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5908194
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4797990
|
Sensitive
|
lineage1.1.2
|
in
|
SRR6785201
|
RR-TB
|
lineage2.2.1
|
None
|
ERR11044324
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798478
|
HR-TB
|
lineage1.1.2
|
in
|
SRR11786870
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6257016
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800385
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR21662813
|
HR-TB
|
lineage2.2.1
|
None
|
SAMN02419542
|
MDR-TB
|
lineage2.2.1
|
by
|
ERR11043176
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11043737
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827522
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2517000
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR4796663
|
HR-TB
|
lineage1.1.2
|
in
|
ERR4797603
|
Sensitive
|
lineage1.1.2
|
in
|
ERR11798601
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4798178
|
HR-TB
|
lineage1.1.2
|
in
|
SRR10303338
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4817254
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR5865711
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5865712
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4820859
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
SRR2100949
|
Sensitive
|
lineage1.1.2
|
None
|
ERR13261369
|
Sensitive
|
lineage1.1.2
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR6511639
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11044163
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822393
|
Pre-XDR-TB
|
lineage2.2.1
|
kg
|
ERR5917756
|
HR-TB
|
lineage2.2.1
|
by
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR1036292
|
HR-TB
|
lineage2.2.1
|
pt
|
ERR11081032
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799563
|
Pre-XDR-TB
|
lineage1.1.2
|
in
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4799956
|
HR-TB
|
lineage1.1.2
|
in
|
SRR29053315
|
HR-TB
|
lineage2.2.1
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4797133
|
MDR-TB
|
lineage1.1.2
|
in
|
SRR6785154
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2517103
|
MDR-TB
|
lineage1.1.2
|
gb
|
ERR278568
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4815476
|
HR-TB
|
lineage2.2.1
|
gb
|
ERR11043765
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2514689
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4827753
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR356390
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710159
|
HR-TB
|
lineage2.2.1
|
None
|
SRR10380113
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR11786872
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2864290
|
MDR-TB
|
lineage2.2.1
|
pt
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
SRR24710265
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4822074
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR5917664
|
MDR-TB
|
lineage2.2.1
|
by
|
SRR6832184
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11081813
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR11081452
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081308
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6045290
|
RR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4814816
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR4188350
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR123932
|
Sensitive
|
lineage1.1.2
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR11786867
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11786871
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR19977734
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR11044657
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710000
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675494
|
RR-TB
|
lineage4.9
|
None
|
SRR19977736
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR294212
|
Sensitive
|
lineage1.1.2
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4798492
|
Sensitive
|
lineage1.1.2
|
in
|
ERR4797028
|
Pre-XDR-TB
|
lineage1.1.2
|
in
|
ERR4798435
|
Sensitive
|
lineage1.1.2
|
in
|
ERR144566
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4796369
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR11641190
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4818854
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR2600537
|
Other
|
lineage2.2.1;lineage4
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
ERR4822372
|
HR-TB
|
lineage2.2.1
|
kg
|
ERR4827494
|
HR-TB
|
lineage2.2.1
|
None
|
SRR19977730
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR1162502
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28351594
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR29772547
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3639773
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11786873
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23340138
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28351203
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR13180367
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
ERR11068784
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR152759
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR29230886
|
Sensitive
|
lineage1.1.2
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
ERR4827793
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4797627
|
Sensitive
|
lineage1.1.2
|
in
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
SRR29230673
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4797073
|
Sensitive
|
lineage1.1.2
|
in
|
ERR11043175
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4827987
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29539798
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232655
|
MDR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
SRR11786862
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14782004
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665994
|
Other
|
lineage4.9
|
None
|
SRR5266537
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR7975651
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
ERR4821053
|
RR-TB
|
lineage3
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR11082638
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2693228
|
RR-TB
|
lineage4.9
|
None
|
ERR2516941
|
MDR-TB
|
lineage1.1.2
|
gb
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR24710186
|
HR-TB
|
lineage2.2.1
|
None
|
ERR158590
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR4796357
|
HR-TB
|
lineage1.1.2
|
in
|
ERR4800039
|
MDR-TB
|
lineage1.1.2
|
in
|
ERR4799273
|
Sensitive
|
lineage1.1.2
|
in
|
ERR11050143
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29230667
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4815483
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
ERR11081767
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR10397097
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516812
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR19977729
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2516784
|
MDR-TB
|
lineage2.2.1
|
gb
|
ERR4822376
|
Pre-XDR-TB
|
lineage2.2.1
|
kg
|
SRR13232451
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR28239581
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR4817991
|
Sensitive
|
lineage1.1.2
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
ERR5311089
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2513085
|
HR-TB
|
lineage1.1.2
|
gb
|
SRR6485123
|
Other
|
lineage2.2.1
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR16088335
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797758
|
Pre-XDR-TB
|
lineage1.1.2
|
in
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR8650528
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10465859
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551477_ERR551478
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11033663
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2514594
|
Sensitive
|
lineage1.1.2
|
gb
|
SRR29230867
|
Sensitive
|
lineage1.1.2
|
None
|
ERR552475
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827754
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3283017
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
|
None
|
ERR551477
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
ERR4815701
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
ERR11081310
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR25827695
|
MDR-TB
|
lineage1.1.2;lineage3.1.2
|
None
|
ERR13284880
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797476
|
Sensitive
|
lineage1.1.2
|
in
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR28044410
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR228014
|
HR-TB
|
lineage2.2.1
|
ru
|
SRR28706444
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2509673
|
Other
|
lineage2.2.1
|
None
|
ERR4796362
|
Sensitive
|
lineage1.1.2
|
in
|
SRR2100263
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1180994
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR19977733
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4799930
|
Pre-XDR-TB
|
lineage1.1.2
|
in
|
ERR11081126
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|