Rv3793 - c.1194C>G


Drug resistance types
286 Sensitive 4 RR-TB 39 HR-TB 19 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 62 Other
lineage Counts
lineage Count
lineage6.1.1 1
lineage4.6.1 2
lineage3 29
lineage4 8
lineage7 21
29
lineage6 2
lineage4.8 12
lineage4.2.2.2 3
lineage2.2.1 27
lineage6.2.2;lineage4 1
lineage4.1.2 4
La1.7.1 7
lineage4.9.1 13
lineage3.1.1 46
lineage1.1.2 14
lineage1.2.2.1 9
lineage1.2.2.2 9
lineage4.2.1 1
lineage1.1.3.2 24
lineage4.3.4.2.1 43
lineage4.3.4.2 3
lineage4.3.4.1 4
lineage4.6.3 2
lineage4.9 3
lineage4.1.2.1 10
lineage4.3.2.1 1
lineage4.4.1.1 3
lineage4.3.4.2.1;lineage4.3.4.1 1
lineage1.1.3 1
lineage1.2.2 1
lineage2.2.2 1
lineage4.3.3 2
La1.3 1
lineage1.1.1.1 1
lineage1.1.3.1 1
lineage2.2.1.1 4
lineage4.2.1.1 1
La1.8.1 10
lineage4.6 1
lineage4.8.2 16
lineage4.1.1 9
lineage3.1.2.1 3
lineage4.1.1.3 3
lineage4.6.1.2 1
lineage4.1.1.3.1 16
lineage4.8.1 1
lineage3.1.2 2
lineage4.6.2.2 1
lineage4.6.2.1 1
lineage4.1.4 1
lineage4.4.2 1
lineage5.1.3 1
lineage2.2.1.2 3
lineage2.2 2
lineage9 1
lineage4.6.1.1 1
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 420
Geographic prevalence
Country level data for this variant is available for 297 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR233362 Sensitive lineage6.1.1 sn
ERR1199059 Sensitive lineage4.6.1 None
ERR1200609 Sensitive lineage3 et
SRR3675312 HR-TB lineage4 None
ERR233346 Sensitive lineage7 None
SRR3675501 HR-TB None
SRR3675502 Other None
ERR233368 Sensitive lineage6 None
ERR1199039 Sensitive lineage4.6.1 None
ERR841397 Sensitive lineage4.8 rs
ERR1200637 Sensitive lineage4.2.2.2 et
ERR841400 Other lineage4.8 None
ERR212001 HR-TB None
SRR3675550 Other None
ERR1200631 Sensitive lineage7 et
SAMN03246463 Pre-XDR-TB lineage2.2.1 cn
ERR233367 Sensitive lineage6.2.2;lineage4 None
ERR841404 Sensitive lineage4.1.2 ch
ERR1200613 Sensitive lineage7 et
ERR233369 Other lineage4.8 et
SRR4019491 Other La1.7.1 None
ERR4816656 HR-TB None
ERR245650 Sensitive lineage4.9.1 mw
ERR1200630 Sensitive lineage3.1.1 et
ERR234127 Sensitive lineage2.2.1 None
ERR234126 Sensitive lineage2.2.1 cn
ERR234128 Sensitive lineage2.2.1 cn
ERR234179 Sensitive lineage3 None
ERR234237 Sensitive lineage1.1.2 None
ERR1200629 Sensitive lineage1.2.2.1 et
ERR233353 Sensitive lineage1.2.2.1 et
ERR233364 Other lineage1.2.2.2 cn
ERR234139 Sensitive lineage2.2.1 None
ERR234138 Sensitive lineage2.2.1 cn
ERR1035162 Other None
ERR245651 MDR-TB lineage1.2.2.2 mw
ERR1200605 Other lineage4.2.1 et
ERR245653 Sensitive lineage4.9.1 mw
ERR245656 Sensitive lineage1.1.3.2 mw
ERR245646 Sensitive lineage3.1.1 mw
ERR245649 Other lineage4.8 mw
ERR245647 Sensitive lineage1.1.3.2 mw
ERR245648 Other lineage1.1.3.2 mw
ERR245652 Sensitive lineage1.1.3.2 mw
ERR245655 Sensitive lineage2.2.1 mw
ERR245654 Sensitive lineage1.1.3.2 mw
ERR245657 Sensitive lineage1.1.3.2 mw
ERR245658 Sensitive lineage4.9.1 mw
ERR245667 Sensitive lineage4.3.4.2.1 mw
ERR245659 Other lineage4.9.1 mw
ERR245662 Sensitive lineage1.2.2.1 None
ERR245671 Sensitive lineage3.1.1 mw
ERR245661 Sensitive lineage4.3.4.2.1 mw
ERR245660 Sensitive lineage2.2.1 mw
ERR245668 Sensitive lineage3.1.1 mw
ERR245664 Sensitive lineage4.3.4.2.1 mw
ERR245663 Other lineage2.2.1 mw
ERR245673 Sensitive lineage4.3.4.2.1 mw
ERR245666 Sensitive lineage4.3.4.2 mw
ERR245669 Other lineage3 mw
ERR245672 Sensitive lineage1.2.2.1 mw
ERR245676 Sensitive lineage3.1.1 mw
ERR245682 Other lineage3 mw
ERR245670 MDR-TB lineage1.2.2.2 mw
ERR245675 Sensitive lineage1.1.2 None
ERR245674 Sensitive lineage1.1.3.2 mw
ERR245677 Sensitive lineage1.1.3.2 mw
ERR245678 Other lineage3 mw
ERR245679 Sensitive lineage1.1.3.2 mw
ERR245680 Sensitive lineage2.2.1 mw
ERR245683 Sensitive lineage4.3.4.2.1 mw
ERR245681 Sensitive lineage4.3.4.2.1 mw
ERR245685 Sensitive lineage4.9.1 mw
ERR245684 Sensitive lineage3.1.1 mw
ERR245687 Sensitive lineage3.1.1 mw
ERR245690 Sensitive lineage4.3.4.1 mw
ERR245688 Sensitive lineage3.1.1 mw
ERR245686 Other lineage4.3.4.2 mw
ERR245693 Sensitive lineage4.3.4.2.1 mw
ERR245692 Sensitive lineage2.2.1 mw
ERR245691 Sensitive lineage1.1.2 mw
ERR245695 Sensitive lineage1.1.3.2 mw
ERR245697 Sensitive lineage4.3.4.1 mw
ERR245694 Sensitive lineage3.1.1 mw
ERR245696 Sensitive lineage2.2.1 mw
ERR245701 Other lineage4.8 mw
ERR245698 Sensitive lineage1.1.2 mw
ERR245700 Sensitive lineage4.3.4.2.1 mw
ERR245706 Sensitive lineage4.3.4.2.1 mw
ERR245711 Other lineage4.1.2 mw
ERR245702 Sensitive lineage3.1.1 mw
ERR245716 Sensitive lineage2.2.1 None
ERR245704 Sensitive lineage3.1.1 mw
ERR245705 Sensitive lineage1.1.3.2 mw
ERR245707 Sensitive lineage4.3.4.2.1 mw
ERR245710 Sensitive lineage2.2.1 mw
ERR245712 Sensitive lineage4.9.1 mw
ERR245714 Sensitive lineage4.9.1 mw
ERR245709 Other lineage4.3.4.2.1 mw
ERR245715 Sensitive lineage3.1.1 mw
ERR245726 Sensitive lineage3.1.1 mw
ERR245713 Sensitive lineage3.1.1 mw
ERR245717 Sensitive lineage1.1.3.2 mw
ERR1200614 Sensitive lineage4.6.3 et
ERR245719 Sensitive lineage4.9.1 mw
ERR245718 HR-TB lineage4.3.4.2.1 mw
ERR245721 Sensitive lineage1.1.3.2 mw
ERR245722 Other lineage3 mw
ERR245724 Sensitive lineage4.3.4.2.1 mw
ERR245720 Sensitive lineage1.1.3.2 mw
ERR245727 Sensitive lineage1.2.2.1 mw
ERR245723 Sensitive lineage2.2.1 mw
ERR245725 HR-TB lineage4.3.4.2.1 mw
ERR245731 Sensitive lineage4.9.1 mw
ERR245735 Sensitive lineage2.2.1 mw
ERR245734 Sensitive lineage1.1.3.2 mw
ERR245733 HR-TB lineage4.3.4.2.1 mw
ERR245728 Sensitive lineage2.2.1 mw
ERR245732 Sensitive lineage3.1.1 mw
ERR245738 Sensitive lineage4.3.4.2.1 mw
ERR245729 Other lineage4.3.4.2.1 mw
ERR245744 Sensitive lineage4.3.4.2.1 mw
ERR245736 Sensitive lineage4.9 mw
ERR245737 Sensitive lineage4.3.4.2.1 mw
ERR245740 Sensitive lineage4.1.2 None
ERR245745 Sensitive lineage4.3.4.1 mw
ERR245739 Sensitive lineage1.2.2.1 mw
ERR245741 MDR-TB lineage4.3.4.2.1 mw
ERR245746 Sensitive lineage4.3.4.2.1 mw
ERR245748 Sensitive lineage1.1.3.2 mw
ERR245749 Sensitive lineage4.3.4.2.1 mw
ERR245750 Sensitive lineage4.3.4.2.1 mw
ERR245759 HR-TB lineage4.1.2.1 mw
ERR245758 Other lineage4.9.1 None
ERR245764 HR-TB lineage3.1.1 None
ERR245757 HR-TB lineage3.1.1 mw
ERR245762 Sensitive lineage4.3.2.1 mw
ERR245761 Sensitive lineage1.1.3.2 mw
ERR245756 Sensitive lineage4.3.4.2.1 mw
ERR245755 Sensitive lineage4.3.4.2.1 mw
ERR245766 Sensitive lineage3.1.1 mw
ERR245765 Sensitive lineage4.3.4.1 mw
ERR245763 Sensitive lineage1.1.3.2 mw
ERR245774 HR-TB lineage4.1.2.1 mw
ERR245776 Sensitive lineage4.3.4.2.1 mw
ERR245770 Sensitive lineage4.3.4.2.1 mw
ERR245768 Sensitive lineage3.1.1 mw
ERR245775 Sensitive lineage1.1.3.2 mw
ERR245778 Sensitive lineage4.3.4.2.1 mw
ERR245793 Other lineage3 mw
ERR245784 Sensitive lineage1.1.3.2 mw
ERR245786 Sensitive lineage4.1.2 mw
ERR245788 Sensitive lineage4.3.4.2.1 mw
ERR245792 HR-TB lineage3.1.1 mw
ERR245796 Sensitive lineage3.1.1 mw
ERR245800 Sensitive lineage4.4.1.1 mw
ERR245797 Sensitive lineage4.3.4.2.1;lineage4.3.4.1 mw
ERR245803 Sensitive lineage3.1.1 mw
ERR245812 Sensitive lineage4.3.4.2.1 mw
ERR245806 Sensitive lineage4.8 mw
ERR245810 Sensitive lineage4.9.1 None
ERR245801 Other lineage4.3.4.2.1 None
ERR245808 Sensitive lineage4.3.4.2.1 mw
ERR245819 Other lineage3.1.1 None
ERR245820 Sensitive lineage1.1.3.2 None
ERR245822 Other lineage1.1.3.2 None
ERR245824 Sensitive lineage4.3.4.2.1 None
ERR245825 Sensitive lineage1.1.3 None
ERR245831 Sensitive lineage2.2.1 mw
ERR245834 Sensitive lineage2.2.1 mw
ERR245835 Other lineage4.9.1 mw
ERR245827 Sensitive lineage3.1.1 mw
ERR245833 Sensitive lineage1.2.2.2 mw
ERR245836 MDR-TB lineage1.2.2 mw
ERR245840 Sensitive lineage3.1.1 mw
ERR245844 Sensitive lineage1.1.3.2 mw
ERR245847 Sensitive lineage4.9.1 mw
ERR1200625 Sensitive lineage7 et
ERR4818929 HR-TB None
ERR1200636 Other lineage7 et
ERR1200606 Sensitive lineage7 et
ERR1200602 Sensitive lineage7 et
ERR233360 Sensitive lineage3 None
ERR233351 Sensitive lineage1.1.2 et
SRR5341418 Other None
ERR1200638 Sensitive lineage3 et
ERR1200608 Sensitive lineage7 et
ERR1200635 Sensitive lineage7 et
ERR233354 Sensitive lineage7 None
ERR233358 RR-TB lineage4.1.2.1 mx
ERR233359 Sensitive lineage2.2.2 kr
ERR2516483 HR-TB lineage4 pe
ERR1200615 Sensitive lineage4.8 et
ERR1200627 Sensitive lineage4.3.3 et
ERR1200604 Sensitive lineage7 et
ERR1200622 Other La1.3 et
ERR1200623 Sensitive lineage7 et
ERR233366 Sensitive lineage6 None
ERR1200628 Sensitive lineage4.1.2.1 None
ERR1200634 Sensitive lineage7 et
ERR1200607 HR-TB lineage3 et
ERR233352 Sensitive lineage4.1.2.1 None
ERR1200616 Sensitive lineage4.1.2.1 et
ERR233350 MDR-TB lineage4.2.2.2 et
ERR1200610 Sensitive lineage7 et
ERR1200624 Sensitive lineage7 et
ERR233365 Sensitive lineage1.1.1.1 vn
SRR5535933 HR-TB None
ERR1200632 Sensitive lineage1.1.3.1 et
SRR6045053 Other None
ERR233370 Other lineage2.2.1 None
SRR6046046 Other None
SRR6046824 HR-TB None
SRR6046362 HR-TB None
ERR4830353 Other None
ERR1200626 Sensitive lineage1.1.2 et
SRR6046482 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR1200619 Sensitive lineage7 et
SRR6079962 HR-TB lineage2.2.1.1 None
ERR233357 Other lineage2.2.1 None
ERR1200640 Sensitive lineage7 et
SRR6832787 RR-TB lineage2.2.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR036230 Sensitive lineage1.1.3.2 mw
ERR233347 Sensitive lineage3 None
ERR502889 Other None
SRR8073606 Other La1.8.1 None
ERR036199 Sensitive lineage4.3.4.2.1 mw
ERR1200621 Sensitive lineage4.6 et
ERR1200633 Sensitive lineage7 et
ERR040087 Sensitive lineage3.1.1 gb
ERR037488 Other lineage3 mw
ERR037553 Sensitive lineage4.3.4.2.1 mw
ERR038269 Sensitive lineage3.1.1 gb
ERR040090 Sensitive lineage3.1.1 gb
ERR040086 Sensitive lineage3.1.1 gb
ERR040095 Sensitive lineage4.8.2 gb
ERR037543 Sensitive lineage4.8 mw
ERR038278 Sensitive lineage4.1.1 gb
ERR040089 Sensitive lineage3.1.1 gb
ERR040093 Sensitive lineage3.1.1 gb
ERR040091 Sensitive lineage3.1.1 gb
ERR040092 Sensitive lineage3.1.1 None
ERR040094 Sensitive lineage4.8.2 gb
ERR040105 Sensitive lineage4.8.2 gb
ERR040102 Sensitive lineage4.8.2 gb
ERR040096 Sensitive lineage4.8.2 gb
ERR040098 Sensitive lineage4.8.2 gb
ERR040099 Sensitive lineage4.8.2 gb
ERR040114 Sensitive lineage3.1.2.1 ug
ERR040106 Sensitive lineage3.1.1 gb
ERR040108 Sensitive lineage3.1.1 gb
ERR040118 MDR-TB lineage3 ug
ERR040112 Sensitive lineage4.3.4.2.1 ug
ERR040121 MDR-TB lineage1.1.2 ug
ERR040115 MDR-TB lineage4.1.1.3 ug
ERR040133 Sensitive lineage3.1.1 ug
ERR040128 MDR-TB lineage4.4.1.1 ug
ERR040120 MDR-TB lineage4.3.4.2.1 ug
ERR040123 MDR-TB lineage3.1.2.1 ug
ERR040119 HR-TB lineage3.1.2.1 ug
ERR040139 MDR-TB lineage3 ug
ERR040125 MDR-TB lineage4.6.1.2 ug
ERR040130 MDR-TB lineage4.4.1.1 ug
ERR040141 MDR-TB ug
ERR040136 MDR-TB lineage3 ug
ERR046743 Sensitive lineage4.1.1 gb
ERR046738 Sensitive lineage4.1.1 gb
ERR046737 Sensitive lineage4.1.1 gb
ERR046739 Sensitive lineage4.1.1 gb
ERR046750 Other La1.8.1 None
ERR046756 Sensitive lineage4.8.2 gb
ERR046748 Other La1.8.1 gb
ERR046744 Sensitive lineage4.1.1 gb
ERR046763 Sensitive lineage4.8.2 gb
ERR046757 Sensitive lineage4.8 None
ERR046754 Sensitive lineage4.8.2 gb
ERR046761 Sensitive lineage4.8.2 gb
ERR046764 Sensitive lineage4.8.2 gb
ERR046759 Sensitive lineage4.8.2 gb
ERR046783 Sensitive lineage4.1.1.3.1 gb
ERR046768 Sensitive lineage4.8.2 gb
ERR046775 Sensitive lineage3.1.1 gb
ERR046771 Sensitive lineage3.1.1 gb
ERR046774 Other La1.8.1 None
ERR046785 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR046777 HR-TB lineage4.8.1 gb
ERR046784 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR046788 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR046790 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR046797 Sensitive lineage4.1.1.3.1 gb
ERR046782 Sensitive lineage4.1.1.3.1 gb
ERR046787 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR046786 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR046794 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR046799 Sensitive lineage4.1.1.3.1 gb
ERR046811 Sensitive lineage3 None
ERR046812 Sensitive lineage3 None
ERR046804 Sensitive lineage3 None
ERR046819 Sensitive lineage4.1.1 gb
ERR046813 Sensitive lineage3 None
ERR046808 Sensitive lineage3 None
ERR046820 Sensitive lineage4.8.2 gb
ERR046824 Sensitive lineage1.2.2.2 gb
ERR046817 Sensitive lineage4.9 None
ERR046826 Sensitive lineage3 None
ERR046815 Sensitive lineage3.1.2 None
ERR046823 Sensitive lineage1.2.2.2 gb
ERR046834 HR-TB lineage4.6.2.2 gb
ERR046836 Sensitive lineage4.3.4.2.1 gb
ERR046837 Sensitive lineage4.3.4.2.1 gb
ERR046831 Sensitive lineage4.8 gb
ERR046843 Sensitive lineage4.1.1.3.1 gb
ERR046848 Sensitive lineage1.2.2.1 gb
ERR046838 Sensitive lineage4.6.2.1 gb
ERR046845 Sensitive lineage3.1.1 gb
ERR046846 Sensitive lineage3 gb
ERR046842 Sensitive lineage4.1.1 gb
ERR046851 Sensitive lineage4.1.1.3.1 gb
ERR046849 Sensitive lineage1.1.2 gb
ERR046850 Sensitive lineage1.2.2.2 gb
ERR046847 Sensitive lineage3.1.1 gb
ERR046840 Sensitive lineage4.1.1 gb
ERR046856 MDR-TB lineage1.1.2 gb
ERR046858 Sensitive lineage3.1.1 gb
ERR046861 Sensitive lineage3.1.1 gb
ERR046869 Sensitive lineage4.1.1.3 gb
ERR046871 Sensitive lineage4.3.4.2.1 gb
ERR046872 Sensitive lineage4.1.2.1 gb
ERR046866 Sensitive lineage3.1.1 gb
ERR046873 Sensitive lineage4.1.2.1 gb
ERR046868 Sensitive lineage4.1.1.3 gb
ERR046864 Sensitive lineage4.1.4 gb
ERR046874 Sensitive lineage4.1.2.1 gb
ERR046882 Sensitive lineage3 gb
ERR046870 Sensitive lineage4.3.4.2.1 gb
ERR046880 Sensitive lineage1.2.2.2 gb
ERR046878 Sensitive lineage4.8.2 gb
ERR046883 Sensitive lineage3 gb
ERR046881 Sensitive lineage1.2.2.2 gb
ERR046885 Sensitive lineage4.3.4.2.1 gb
ERR046886 Sensitive lineage1.2.2.1 None
ERR046875 Sensitive lineage4.1.2.1 gb
ERR046900 Sensitive lineage1.1.2 gb
ERR046890 Sensitive lineage4.8 gb
ERR046892 Sensitive lineage4.4.2 gb
ERR046898 Sensitive lineage1.2.2.1 gb
ERR046908 Sensitive lineage4.1.1.3.1 gb
ERR046907 Sensitive lineage1.1.2 gb
ERR046905 Sensitive lineage1.1.2 gb
ERR046914 Sensitive lineage3.1.1 gb
ERR046911 Pre-XDR-TB lineage4.1.1.3.1 gb
ERR046918 RR-TB lineage5.1.3 gb
ERR046919 Sensitive lineage4.1.1.3.1 gb
ERR047003 Sensitive lineage2.2.1 gb
ERR046965 Sensitive lineage3.1.1 gb
ERR133986 HR-TB None
ERR067681 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3283021 HR-TB None
ERR3439432 Other None
ERR403298 HR-TB lineage4 None
ERR473323 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
SRR125289 Sensitive lineage2.2.1.2 None
ERR4798406 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR736856 HR-TB lineage4 None
SRR1183106 Other lineage2.2.1.1 None
ERR7821163 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180479 Other lineage1.1.2 None
SRR125287 Sensitive lineage2.2.1 None
SRR125295 Sensitive lineage2.2.1 None
SRR125305 Sensitive lineage2.2.1.2 None
SRR125300 Sensitive lineage2.2.1.2 None
SRR1791940 Other La1.8.1 None
SRR14782405 HR-TB None
SRR1791776 Other La1.7.1 None
SRR1791907 Other La1.8.1 None
SRR1792002 Other La1.7.1 None
SRR1792073 Other La1.7.1 None
SRR1792495 Other La1.7.1 None
SRR1792282 Other La1.8.1 None
SRR2100072 Other La1.8.1 None
SRR1792499 Other La1.7.1 None
SRR1792506 Other La1.8.1 None
SRR2100074 Other La1.8.1 None
SRR1792486 Other La1.7.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR2100068 Sensitive lineage3.1.1 None
SRR2100073 Sensitive lineage4.8 None
SRR2100082 Sensitive lineage3 None
SRR2100083 Sensitive lineage3 None
SRR2100078 Sensitive lineage3 None
SRR2100088 Sensitive lineage3 None
SRR2100081 Sensitive lineage3 None
SRR8692790 RR-TB lineage4 None
SRR2100092 Sensitive lineage1.1.2 None
SRR2100085 Sensitive lineage3.1.2 None
ERR553385 Sensitive lineage4.3.4.2 de
ERR233348 Sensitive lineage4.6.3 et
ERR233355 Sensitive lineage7 None
ERR158583 HR-TB None
SRR3675222 Other None
ERR181315 MDR-TB lineage9 so
ERR181440 Sensitive lineage2.2.1 dj
ERR1200620 MDR-TB lineage4.2.2.2 et
ERR1199034 Sensitive lineage4.6.1.1 ug
SRR3675488 HR-TB None
ERR233363 Sensitive lineage1.1.1 None
ERR161034 Other lineage4.3.4.2.1 None
ERR1200618 Sensitive lineage7 None
ERR233361 Sensitive lineage2.2.1.1 None
ERR1200603 Sensitive lineage7 None
ERR1193641 Sensitive lineage4.3.3 et