EBG00000313325 - n.1001C>G
Drug resistance types
10 Sensitive
7 RR-TB
1 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2 | 1 |
| lineage2.2.1 | 5 |
| lineage4.9 | 10 |
| lineage4.3.2.1 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4.8 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.3 | 3 |
| lineage3 | 2 |
| lineage4 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.6 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.6.2.2 | 1 |
| La1.7.1 | 1 |
| lineage2.2.1.1 | 1 |
| La1.2.BCG | 1 |
| 1 | |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4810841 | Sensitive | lineage2.2.1 | cn | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR4810817 | Sensitive | lineage2.2.1 | cn | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR3806588 | Other | lineage6 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR6865446 | Other | lineage4.4.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR18213909 | Other | lineage4.1.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | SRR18391760 | Other | La1.7.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR23691351 | Sensitive | lineage2.2.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4816090 | Other | La1.2.BCG | None | ERR4817069 | RR-TB | None | SRR4033466 | HR-TB | lineage4.3.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR6046152 | Other | lineage4.9 | None |
|---|
