EBG00000313325 - n.1002G>T
Drug resistance types
31 Sensitive
0 RR-TB
15 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6 | 1 |
| lineage4.8 | 4 |
| lineage2.2.2 | 1 |
| lineage4.3.3 | 6 |
| lineage4.4.1.1 | 4 |
| lineage4.1.2 | 2 |
| lineage2.2.1 | 4 |
| lineage1.1.3 | 1 |
| lineage4.6.4 | 1 |
| lineage4.9 | 8 |
| lineage4 | 8 |
| 13 | |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3 | 1 |
| lineage4.6.2.2 | 1 |
| La1.8.1 | 3 |
| lineage4;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 65 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10993956 | Other | La1.6 | None | ERR2515460 | Sensitive | lineage4.8 | za | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR1577252 | HR-TB | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | ERR4819910 | Other | lineage4.9 | None | ERR4819942 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6982078 | Sensitive | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982192 | Sensitive | lineage4.1.1.3 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982196 | Sensitive | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982405 | Sensitive | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR3283028 | Other | None | ERR10796596 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | ERR3283014 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR405209 | Sensitive | lineage4 | None |
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