EBG00000313339 - n.1058delT
Drug resistance types
9 Sensitive
9 RR-TB
6 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage4.2.1.1 | 1 |
| 1 | |
| lineage3 | 2 |
| lineage3.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.9 | 12 |
| La3;lineage4 | 1 |
| La1.8.1 | 1 |
| lineage4.4.2 | 2 |
| lineage2.2;lineage4 | 2 |
| La3;lineage4.9 | 3 |
| lineage4.8 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR8692905 | Sensitive | None | ERR9786076 | Sensitive | lineage3 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3797067 | Other | La1.8.1 | None | SRR1173719 | Other | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR8692904 | Other | lineage4.9 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR4769474 | HR-TB | lineage4.9 | None |
|---|
