EBG00000313339 - n.1058delT
Drug resistance types
8 Sensitive
9 RR-TB
17 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 21 |
| lineage3 | 5 |
| lineage2.2.1.1 | 1 |
| 9 | |
| lineage2.2.1 | 6 |
| lineage4.8 | 3 |
| lineage4.4.2 | 2 |
| lineage4.2.1 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4 | 10 |
| lineage4;lineage2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| La1.3 | 4 |
| La1.8.1 | 2 |
| lineage4.9;La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6359074 | HR-TB | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR16156832 | RR-TB | None | SRR1173310 | MDR-TB | None | SRR1173719 | HR-TB | lineage3 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR8692759 | Other | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR21675425 | HR-TB | lineage4.8 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692885 | Other | lineage4.9 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692904 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692824 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692776 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692775 | Other | lineage4.9 | None | SRR8692832 | Other | lineage4.9 | None | ERR4817840 | Other | lineage3.1.2.2 | gb | ERR4815079 | RR-TB | lineage3 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SRR8692887 | Other | None | SRR8692899 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR6044876 | Sensitive | lineage4 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821260 | Other | lineage5.1.1 | gb | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR6044835 | Sensitive | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046435 | HR-TB | lineage3 | gb | SRR6785281 | Other | lineage4.2.1.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR6896545 | Other | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR3283014 | HR-TB | None | SRR9971113 | Other | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR4769555 | Other | La1.3 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797068 | Other | La1.8.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR3797079 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None |
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