EBG00000313339 - n.2217C>T
Drug resistance types
25 Sensitive
1 RR-TB
24 HR-TB
6 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 3 |
| lineage4.9 | 65 |
| lineage2.2.1 | 16 |
| lineage3.1.1 | 3 |
| lineage4.3.3 | 4 |
| lineage2.2.1.1 | 2 |
| lineage4.9.1 | 1 |
| lineage2.2.2 | 10 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage2.2.2;lineage4 | 3 |
| lineage4.5 | 3 |
| lineage4.3.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 2 |
| lineage2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage6.2.3 | 1 |
| lineage1.1.3.2 | 1 |
| La1.7.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.8 | 2 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 134 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1013596 | Sensitive | lineage3 | None | SRR1182958 | Other | lineage4.9 | None | SRR24083702 | Sensitive | lineage2.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | ERR3470682 | Other | lineage3 | None | ERR9117740 | Other | lineage3.1.1 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SRR1182924 | Sensitive | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR1183388 | Other | lineage4.9 | None | SRR1182883 | Other | lineage4.9 | None | SRR1048983 | HR-TB | lineage2.2.1.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR216928 | Other | lineage4.9.1 | None | ERR216901 | Other | lineage3.1.1 | None | SRR1183456 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR1180115 | Other | lineage4.9 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183414 | Other | lineage4.9 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SRR1173113 | Other | lineage4.3;lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR1183389 | Sensitive | lineage4.9 | None | SRR1181377 | Other | lineage4.9 | None | SRR1013610 | Sensitive | lineage4 | None | SRR1183325 | Other | lineage4.9 | None | SRR1181587 | Other | lineage4.9 | None | SRR1238557 | Other | lineage4.9 | None | SRR1183290 | Other | lineage4.9 | None | SRR1180062 | Other | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | SRR1180125 | Other | lineage4.9 | None | SRR1180106 | Other | lineage4.9 | None | SRR1013597 | Sensitive | lineage2.2.2;lineage4 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SRR1173521 | Other | lineage4.9 | None | SRR5073829 | Sensitive | lineage2.2.1 | vn | SRR1180154 | Other | lineage4.9 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR245790 | Sensitive | lineage4.3.4.2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR1183438 | Other | lineage4.9 | None | SRR1182912 | Other | lineage4.9 | None | SRR1173416 | Sensitive | lineage4.9 | None | SRR1013613 | Sensitive | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1180543 | Sensitive | lineage4.9 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181223 | Other | lineage4.9 | None | SRR1048996 | Sensitive | lineage4.5 | None | SRR1013583 | Sensitive | lineage2.2.2 | None | SRR1183214 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1049040 | HR-TB | lineage2 | None | SRR1172753 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SRR1183315 | Other | lineage4.9 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR1183307 | Other | lineage4.9 | None | SRR1183238 | Other | lineage4.9 | None | SRR7131030 | Other | lineage4.1.2.1 | None | SRR1183224 | Other | lineage4.9 | None | SRR1183694 | Sensitive | lineage4.9 | None | SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None | SRR1182953 | Other | lineage4.9 | None | SRR1183445 | Other | lineage4.9 | None | SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None | SRR1183193 | Other | lineage4.9 | None | SRR1182885 | Other | lineage4.9 | None | SRR1180031 | Other | lineage4.9 | None | SRR1181360 | Sensitive | lineage4.9 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180047 | Other | lineage4.9 | None | SRR1183093 | Other | lineage4.9 | None | SRR1180087 | Other | lineage4.9 | None | SRR1180758 | Sensitive | lineage4.9 | None | SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None | SRR1013618 | RR-TB | lineage2.2.1;lineage4 | None | SRR1181245 | Other | lineage4.9 | None | SRR1181359 | Sensitive | lineage4.9 | None | SRR1183373 | Other | lineage4.9 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR1183369 | Other | lineage4.9 | None | SRR1180021 | Sensitive | lineage4.9 | None | ERR10796625 | Other | lineage4.4.1.1 | None | SRR6045162 | Sensitive | lineage4.9 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1181398 | Other | lineage4.9 | None | SRR1180222 | Other | lineage4.9 | None | SRR11972323 | Other | lineage1.1.3.2 | None | SRR1183606 | Sensitive | lineage4.9 | None | ERR4450956 | Other | La1.7.1 | None | SRR1181591 | Sensitive | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR1048995 | HR-TB | lineage4.5 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SRR1180046 | Other | lineage4.9 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1183018 | Other | lineage4.9 | None | SRR1013617 | Sensitive | lineage2.2.1;lineage4 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR1180822 | Other | lineage4.9 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None | SRR1019127 | Other | lineage4.9 | None | SRR1180647 | Other | lineage4.9 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR1183341 | Other | lineage4.9 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180074 | Sensitive | lineage4.9 | None | SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1183435 | Other | lineage4.9 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1183255 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | SRR1183375 | Other | lineage4.9 | None | SRR1183200 | Sensitive | lineage4.9 | None |
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