EBG00000313339 - n.2217C>T


Drug resistance types
17 Sensitive 3 RR-TB 53 HR-TB 26 MDR-TB 33 Pre-XDR-TB 0 XDR-TB 59 Other
lineage Counts
lineage Count
lineage3 13
lineage4.9 16
lineage3.1.2 2
lineage4.3.4.2 2
lineage4.1.2.1 8
lineage3.1.1 5
lineage1.1.2 3
lineage1.2.2.2 1
lineage2.2 20
lineage2.2.1 31
lineage2.2.2 18
16
lineage4 5
lineage4.9;lineage2.2 1
lineage4;lineage2.2.2 1
lineage4.4.2 3
lineage2.2.2;lineage2.2.1 2
lineage4.5 3
lineage4.9;lineage2 1
lineage4.4.1.1.1 1
lineage4.4 2
lineage4.3.3 5
lineage4.3.4 1
lineage4.8 6
lineage1.1.3.2 1
lineage4.9;lineage1.1 2
lineage4.1.1.3 5
La1.8.2 1
lineage4.1.1.3.1 4
lineage4.6.2.2 1
lineage4.9.1 1
lineage3.1 1
lineage2.2.1.1 1
lineage4.3.1.1 2
lineage4.2.2.2 1
lineage4.1.1.2 1
lineage4.4.1.1 2
lineage4.3.2 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 191
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9117728 Other lineage3 None
ERR736850 Sensitive lineage4.9 None
ERR9117714 Other lineage3.1.2 None
ERR6197041 MDR-TB lineage4.3.4.2 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117740 Other lineage3.1.1 None
ERR9117730 Other lineage1.1.2 None
ERR9117827 Other lineage1.2.2.2 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013583 HR-TB lineage2.2 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2 None
SRR1013596 HR-TB lineage3 None
SRR1013595 HR-TB lineage3 None
SRR1013598 HR-TB None
SRR1013597 HR-TB lineage2.2 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013599 HR-TB None
SRR1013607 HR-TB lineage2.2 None
SRR1013608 HR-TB lineage2.2 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013612 HR-TB lineage4 None
SRR1013609 HR-TB lineage4 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013610 HR-TB lineage4 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013617 MDR-TB None
SRR1013618 MDR-TB None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1019127 Other lineage4.9;lineage2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048885 MDR-TB None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048983 HR-TB None
SRR1048980 HR-TB lineage3 None
SRR1048982 HR-TB None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048994 HR-TB lineage4.9 None
SRR1048995 HR-TB lineage4.5 None
SRR1048993 HR-TB lineage4.9 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1048996 HR-TB lineage4.5 None
SRR1049026 Pre-XDR-TB None
SRR1049023 HR-TB lineage2.2 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049041 MDR-TB None
SRR1049027 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1172753 MDR-TB lineage4.4.1.1.1 None
SRR1144759 MDR-TB lineage2.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1172713 MDR-TB lineage4.4 None
SRR1175304 MDR-TB lineage4.3.3 None
SRR1173113 RR-TB lineage4.3.4 None
SRR1173521 HR-TB lineage4.9 None
SRR1173720 Other lineage4.9 None
SRR1175073 Other lineage4.9 None
SRR1172816 MDR-TB lineage4.3.3 None
SRR1173074 Other lineage4.9 None
SRR1173416 Other lineage4.9 None
SRR1173764 Sensitive lineage4.9 None
SRR12634543 Sensitive lineage4.8 None
SRR1184379 Other lineage4 None
SRR11972323 RR-TB lineage1.1.3.2 None
SRR12199400 HR-TB lineage4.9;lineage1.1 None
SRR12199428 Sensitive lineage4.9;lineage1.1 None
SRR13591377 Sensitive lineage4.1.1.3 None
SRR14164405 Sensitive lineage4.3.4.2 None
SRR14782555 Pre-XDR-TB lineage2.2.1 None
SRR15014764 MDR-TB lineage1.1.2 None
SRR15296951 Other La1.8.2 None
SRR18213684 Pre-XDR-TB lineage4.1.1.3.1 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR19303773 Other lineage4.6.2.2 None
SRR19304064 MDR-TB lineage2.2.1 None
SRR19303792 Sensitive lineage4.1.2.1 None
ERR1750905 Sensitive lineage4.3.3 za
SRR3675288 Other lineage3 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SAMN02360581 HR-TB lineage2.2.1 None
ERR216901 Other lineage3.1.1 None
SRR3675557 Other lineage4.9 None
ERR2229133 Sensitive lineage4.8 None
ERR216928 Other lineage4.9.1 None
SAMN02360586 HR-TB lineage2.2.1 None
ERR2229336 Other lineage4.8 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
ERR4816755 Other lineage4.1.1.3 None
SAMN02360590 MDR-TB lineage2.2.2 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02585982 MDR-TB lineage4.3.3 None
SRR5073829 Sensitive lineage2.2.1 vn
ERR245790 Sensitive None
SAMN02360577 HR-TB lineage3 None
ERR2512867 Sensitive lineage4.1.2.1 gb
SAMN02360580 HR-TB lineage2.2.1 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR6045778 Other lineage3.1 None
ERR4820845 MDR-TB lineage4.8 None
SAMN02360585 HR-TB lineage4.5 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR6045621 Other lineage4.1.1.3 None
SRR6046152 Other lineage4.9 None
SRR6044774 Other lineage3 None
SRR6045805 Other lineage4.3.1.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045899 Other lineage4.1.2.1 gb
SRR6044787 Other lineage4.4 None
SRR6045909 Other lineage4.8 None
SRR6044975 Other lineage3 gb
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045024 Other lineage4.1.1.2 None
SRR6045162 Sensitive lineage4.9 None
SRR6045110 Other lineage3 None
SRR6045232 Other lineage4.1.1.3 gb
SRR6045164 Other lineage4.1.2.1 None
SRR6045178 Other lineage3 None
SRR6045248 Other lineage3.1.1 None
SRR6046481 Other lineage4.1.1.3.1 None
SRR6045289 Other None
SRR6046275 Other lineage3.1.1 None
SRR6046456 Other lineage4.1.1.3.1 None
SRR6045379 Other None
SRR6046246 Other lineage3 None
SRR6046273 Other lineage3.1.2 None
SRR6046766 Other lineage3.1.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046558 Other lineage3 gb
SRR6046739 Other lineage1.1.2 None
SRR6046655 Other lineage4.1.2.1 None
SRR6896352 Sensitive lineage4.1.1.3 None
ERR3148546 Other lineage4.3.2 None
SRR6785282 Other lineage4.3.3 None
SRR7131030 Other lineage4.1.2.1 None
SRR6896534 Sensitive None
ERR1063855 Other lineage4 None
SRR7131169 Other lineage4.1.2.1 None
ERR323041 HR-TB None
SRR7131123 Other lineage4.8 None
ERR10796630 HR-TB None
ERR10796625 RR-TB lineage4.4.1.1 None
ERR3261389 Other lineage4.9 None
ERR3797074 Sensitive lineage4.9 None
ERR3797078 Sensitive lineage4.9 None
ERR3470682 Other lineage3 None
ERR4450956 Other La1.7.1 None