EBG00000313339 - n.2507A>T
Drug resistance types
10 Sensitive
9 RR-TB
10 HR-TB
4 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
87 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 1 |
| lineage4.9 | 14 |
| lineage4.4.1.1 | 4 |
| lineage3 | 18 |
| lineage4.8 | 14 |
| lineage4.3.1.1 | 2 |
| lineage4.1.2.1 | 14 |
| La1.8.1 | 2 |
| lineage2.2.1 | 13 |
| lineage4.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.3 | 9 |
| La1.7.X-unk4 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.5 | 1 |
| lineage4.1 | 1 |
| lineage5 | 1 |
| 6 | |
| lineage4 | 2 |
| lineage3.1.1 | 3 |
| lineage4.7 | 1 |
| lineage4.6.2.2 | 4 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 127 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045664 | Other | lineage4.2.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818434 | Sensitive | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045855 | Sensitive | lineage3 | None | ERR4819324 | Other | lineage4.8 | gb | SRR6046616 | Other | lineage4.3.1.1 | None | SRR998818 | HR-TB | lineage4.1.2.1 | None | SRR8600009 | Other | La1.8.1 | None | ERR4819166 | Other | lineage3 | gb | ERR502470 | RR-TB | lineage4.9 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR10796578 | Other | lineage2.2.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR7801208 | Sensitive | lineage4.4.1.1 | None | ERR9117814 | Sensitive | lineage3 | None | SRR1172282 | Other | lineage4.9 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR13046688 | Other | La1.7.X-unk4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815104 | Other | lineage4.8 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18003027 | Other | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815467 | Other | lineage3 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR1949990 | Sensitive | lineage4.8 | None | ERR4817046 | Other | lineage3 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4815919 | Other | lineage4.8 | None | ERR4816183 | Other | None | ERR4816232 | Other | lineage4 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816690 | Other | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817131 | Pre-XDR-TB | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816696 | Other | lineage3 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4818685 | Other | lineage4.6.2.2 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817874 | Other | lineage3 | None | ERR4818752 | Other | lineage3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818064 | Other | lineage4.8 | None | ERR4818190 | Other | lineage4.8 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4819133 | Other | lineage1.2.2.2 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR2514261 | Other | lineage3 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819593 | Other | lineage4.5 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514968 | Other | lineage4.3.3 | None | ERR4820517 | Other | lineage3 | None | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR2515032 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821775 | Other | lineage4 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821584 | Other | lineage4.8.2 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821712 | HR-TB | None |
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