Rv0006 - c.1536C>T
Drug resistance types
6 Sensitive
1 RR-TB
13 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.2.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.9 | 11 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 4 |
| lineage1.1.3.1 | 1 |
| La3;lineage4.8 | 2 |
| lineage2.1 | 3 |
| 3 | |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.9;lineage6.3 | 3 |
| lineage4.1.1.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;lineage4.9 | 4 |
| lineage3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.3.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| lineage1.1.1 | 1 |
| La3;lineage2.2.1 | 1 |
| La3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 64 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR1184381 | MDR-TB | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR400515 | Other | lineage4.1.1.3 | gb | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4821293 | Other | lineage4.1.1.3 | gb | SRR28119777 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR4407452 | Other | lineage3 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR28119805 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1173633 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | ERR4819909 | Sensitive | lineage4.1.2.1 | gb | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR6789626 | Other | None | SRR1196546 | Other | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | SRR28045032 | Sensitive | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR6789621 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR29016780 | Other | lineage4.9 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3416776 | Other | lineage2.1 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None |
|---|
