Rv0006 - c.1536C>T


Drug resistance types
6 Sensitive 1 RR-TB 13 HR-TB 3 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 39 Other
lineage Counts
lineage Count
lineage4.9 11
lineage4.1.2.1 4
lineage1.1.1 1
lineage2.1;lineage4.9;lineage6.3 3
La3;lineage2.1;lineage6.3 1
lineage4.1.1.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage4.9 4
La3;lineage2.1;lineage4.9;lineage6.3 3
La3;lineage4.9 4
lineage4 1
3
lineage1.1.3.1 1
lineage2.1 3
lineage3 1
lineage2.2.2;lineage4 1
lineage4.9;lineage6.3 3
lineage4.3.3 1
La3;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9 2
La3;lineage1.1.2 1
La3;lineage2.2.2 1
lineage2.2.1;lineage6.3 1
La3;lineage4.8 2
La3;lineage2 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 1
lineage2.2.1 2
lineage4.1.1.1 1
spoligotype Counts
spoligotype Count
None 64
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045892 Sensitive lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29016780 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR400515 Other lineage4.1.1.3 gb
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6789626 Other None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4407452 Other lineage3 None
SRR28045032 Sensitive lineage4.1.2.1 None
ERR473334 HR-TB lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
ERR4407463 HR-TB None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR28119777 Other lineage4.9 None
SRR1184381 MDR-TB None
SRR6789621 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR1173633 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4819909 Sensitive lineage4.1.2.1 gb
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR4821293 Other lineage4.1.1.3 gb
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR29017461 Other La3;lineage4.9 None