Rv0006 - c.1536C>T
Drug resistance types
8 Sensitive
5 RR-TB
27 HR-TB
7 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| 37 | |
| lineage4 | 4 |
| La3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.9 | 15 |
| lineage2.2.1 | 3 |
| lineage3.1 | 1 |
| lineage2 | 3 |
| lineage1.1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.8;La3 | 2 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 83 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173400 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1196546 | HR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR15368973 | Other | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR176793 | Other | lineage4.1.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176643 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR2027263 | Other | lineage4 | None | ERR4816964 | Other | lineage4.9 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR3742665 | HR-TB | None | ERR4817060 | RR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4818394 | Other | lineage4.9 | None | SRR6789626 | Other | None | ERR4819933 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044790 | HR-TB | None | ERR400515 | Other | lineage4.1.1.3 | gb | SRR5341302 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4811105 | HR-TB | None | ERR4819909 | Sensitive | lineage4.1.2.1 | gb | ERR4821293 | Other | lineage4.1.1.3 | gb | ERR4407452 | Sensitive | lineage3 | None | ERR4407463 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR736874 | HR-TB | None |
|---|
