Rv0006 - c.2301T>C
Drug resistance types
1 Sensitive
0 RR-TB
80 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| La2 | 1 |
| 97 | |
| lineage4.9 | 6 |
| lineage4 | 7 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 3 |
| La3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1 | 5 |
| lineage3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.5 | 1 |
| lineage2 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | SRR7496509 | Other | None | ERR067681 | HR-TB | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3439432 | Other | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR1034634 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR3797069 | Other | None | ERR3797061 | Other | None | ERR4769452 | HR-TB | None | ERR5336148 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR2514964 | Sensitive | lineage1.1.2 | gb | ERR4769450 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR736867 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | SRR1169249 | Other | La3 | None | ERR9786671 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1172234 | Other | None | SRR1169306 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173118 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1172951 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196566 | HR-TB | None | SRR19304036 | HR-TB | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | ERR4815604 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR1035162 | Other | None | SRR3675502 | Other | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816999 | Other | None | ERR212001 | HR-TB | None | SRR3675572 | Other | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR5007188 | Other | lineage4 | None | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | SRR5341330 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR5341470 | HR-TB | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None |
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