Rv0668 - c.64_66delCAAinsAC
Drug resistance types
55 Sensitive
3 RR-TB
59 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 1 |
| lineage4.9 | 109 |
| La3;lineage4.9 | 8 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.1.2.1 | 3 |
| La1.2.BCG | 1 |
| 1 | |
| La1.7;lineage4.9 | 3 |
| lineage4.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La2;lineage4.9 | 1 |
| lineage4.3.2.1 | 3 |
| lineage2.2.1 | 11 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.5 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1;lineage4.9 | 2 |
| La3;lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4 | 4 |
| La1.8.1 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 181 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR3797029 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR6045795 | Other | lineage2.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR926156 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675246 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None |
|---|
