lineage | Count |
---|---|
49 | |
lineage4.1.2.1 | 5 |
lineage4.9 | 4 |
lineage4.8 | 1 |
La1 | 1 |
lineage4 | 3 |
lineage4.1.3 | 2 |
lineage2 | 3 |
lineage1.2.2.2 | 1 |
lineage3 | 1 |
lineage4.6.1.1 | 1 |
lineage1.1.2 | 2 |
lineage4.6.2.2 | 1 |
lineage3.1 | 1 |
lineage6 | 1 |
lineage4.5 | 1 |
lineage2.2.1 | 3 |
lineage2.2 | 1 |
La1.8.1 | 1 |
lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | SRR7496517 | Other | None | ERR502532 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR6789626 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR323043 | HR-TB | None | ERR4188247 | HR-TB | None | ERR11049020 | Other | lineage4.8 | None | ERR3283010 | Other | La1 | None | ERR3283036 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283027 | HR-TB | None | ERR3797069 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4810741 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR702404 | HR-TB | None | ERR5336148 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR9117709 | HR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR736839 | Other | None | ERR9786604 | Other | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786671 | Other | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1196546 | HR-TB | None | ERR9787197 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR9787165 | Other | lineage6 | None | SRR1172817 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184380 | HR-TB | None | SRR6045526 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675236 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6045503 | HR-TB | None | SRR15368973 | Other | None | SRR20969677 | HR-TB | lineage2 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675311 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | ERR234659 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046225 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None |
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