lineage | Count |
---|---|
lineage4.3.3 | 9 |
lineage4.1.2.1 | 7 |
50 | |
lineage4.3.2 | 1 |
lineage4 | 19 |
lineage2.2.2 | 2 |
lineage4.9 | 10 |
lineage2 | 1 |
lineage4.5 | 1 |
lineage3;lineage2.1 | 1 |
lineage2.2 | 2 |
lineage4.1 | 1 |
lineage2.2.1 | 2 |
lineage4.8 | 1 |
lineage4.3.3;lineage2.2.1 | 2 |
lineage4.3.2.1;lineage2.2.1 | 2 |
lineage3 | 3 |
lineage4.1.1.3 | 1 |
lineage4.1.1 | 1 |
lineage3.1 | 2 |
lineage1.1 | 1 |
La1 | 2 |
spoligotype | Count |
---|---|
None | 121 |
ID | Drug resistance | Lineage | Country iso2 | ERR108483 | Sensitive | lineage4.3.3 | ru | ERR067767 | Sensitive | lineage4.3.3 | ru | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | SRR24256341 | Sensitive | lineage4.3.3 | None | ERR736848 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR8976043 | HR-TB | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119669 | HR-TB | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR13861153 | Other | lineage4.9 | None | SRR069989 | HR-TB | lineage2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR13423544 | Other | lineage4.5 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR21776293 | Sensitive | lineage4.3.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1640750 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675234 | Other | None | ERR2693231 | Other | None | ERR234613 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | ERR2515823 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816470 | Other | lineage3 | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR234605 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR5486889 | Sensitive | lineage4.3.3 | None | ERR2693230 | Other | None | SRR6045952 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR5266561 | Sensitive | lineage4.3.3 | ru | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | ERR323038 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | SRR6855867 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR363437 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797024 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3797083 | HR-TB | None | ERR228031 | Sensitive | lineage4.3.3 | ru | ERR144547 | Sensitive | lineage4.3.3 | ru | ERR108451 | Sensitive | lineage4.3.3 | ru | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None |
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