Rv2754c - c.171C>T
Drug resistance types
3 Sensitive
2 RR-TB
13 HR-TB
4 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 15 |
| lineage4.3.3 | 2 |
| lineage2.1 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.2;lineage4.9 | 2 |
| La1.6;lineage4 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.5 | 1 |
| 4 | |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3 | 2 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283040 | HR-TB | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR3416776 | Other | lineage2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR1173788 | Sensitive | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR16588745 | Sensitive | lineage4.5 | None | SRR1184294 | Other | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR1172857 | Other | None | SRR1184372 | MDR-TB | None | SRR1196566 | Other | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1173355 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1172728 | RR-TB | La3 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1173118 | Other | lineage2.2.1 | None |
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