lineage | Count |
---|---|
lineage4.9 | 10 |
lineage4.3.4.1 | 1 |
lineage4.5 | 1 |
60 | |
lineage4;lineage2.2 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.3.4 | 1 |
lineage3;lineage2.1 | 1 |
lineage2.1 | 1 |
lineage4 | 9 |
lineage4.1.1 | 1 |
lineage4.1.2.1 | 3 |
lineage4.8 | 1 |
lineage1.1 | 1 |
lineage3.1 | 2 |
lineage4.3.4.2.1 | 1 |
La1 | 1 |
La1.8.1 | 1 |
lineage2.2 | 1 |
lineage4.3.3 | 2 |
lineage4.3.2 | 1 |
lineage4.4.1.1 | 1 |
lineage2 | 1 |
spoligotype | Count |
---|---|
None | 104 |
ID | Drug resistance | Lineage | Country iso2 | SRR13861376 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR8692887 | Other | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692893 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR161033 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675383 | HR-TB | None | ERR212034 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341315 | Sensitive | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | ERR2693239 | HR-TB | None | SRR6045555 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6257080 | MDR-TB | lineage4.8 | None | ERR323036 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR5311090 | HR-TB | None | ERR294248 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323038 | HR-TB | None | ERR323063 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3797016 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR3797063 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4769521 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797083 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR6358837 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR702404 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | ERR9119669 | HR-TB | None | SRR069989 | HR-TB | lineage2 | None |
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