EBG00000313325 - n.1000G>C


Drug resistance types
6 Sensitive 7 RR-TB 1 HR-TB 5 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 33 Other
lineage Counts
lineage Count
lineage4.9 8
lineage2.2.1.1 2
lineage4.3.2.1 5
lineage4.3.4.2.1 1
lineage2.2 1
lineage4.1.1.2 1
lineage4.8 4
lineage2.2.1 5
lineage3 4
lineage4;lineage2 1
lineage2.2.2 1
lineage4.1.1.3 2
lineage4.4.1.1 2
lineage1.1.3.2 1
lineage4.9;La1.3 1
La1.2 1
La1.6 1
La1.7.1 4
La1.8.1 1
lineage4.1.2.1 2
lineage4.9.1 1
lineage4.3.3 1
lineage1.2.1.2.1 2
lineage1.1.3 1
lineage4.6.2.2 1
1
spoligotype Counts
spoligotype Count
None 55
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046152 Other lineage4.9 None
SRR5526841 MDR-TB lineage2.2.1.1 None
ERR2660490 Sensitive lineage4.3.2.1 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
SRR6982140 Other lineage2.2 None
ERR2851371 Other lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6982088 Other lineage4.1.1.2 None
SRR6982419 Other lineage4.8 None
SRR6982139 Sensitive lineage4.9 None
SRR6982194 Other lineage2.2.1 None
SRR6896539 MDR-TB lineage3 None
SRR6982510 Sensitive lineage4;lineage2 None
SRR6982494 Other lineage2.2.2 None
SRR6982362 Other lineage4.3.2.1 None
SRR6981966 Other lineage2.2.1 None
SRR6982383 Other lineage4.3.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR9971122 MDR-TB lineage4.8 None
ERR4820586 Other lineage3 gb
ERR037234 Sensitive lineage4.9 None
ERR4769419 Other lineage4.9 None
ERR4178161 Other lineage4.4.1.1 None
ERR3324375 Other lineage1.1.3.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR6865446 Other lineage4.4.1.1 None
ERR6337385 Other La1.2 None
SRR10993951 RR-TB La1.6 None
SRR13199746 Other La1.7.1 None
SRR11294512 Other La1.8.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR18213909 Other lineage4.1.2.1 None
SRR1792247 Other La1.7.1 None
SRR1791909 Other La1.7.1 None
SRR2101628 Other lineage4.3.2.1 None
SRR18911138 Other lineage3 None
SRR18391760 Other La1.7.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR2101685 Sensitive lineage4.9 None
SRR2101643 Other lineage2.2.1 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101816 Other lineage4.8 None
SRR2101691 Other lineage2.2.1 None
SRR21675949 Other lineage4.3.3 None
SRR21240055 Other lineage4.1.2.1 None
SRR21676929 Other lineage1.2.1.2.1 None
SRR21728710 Other lineage4.1.1.3 None
SRR21711124 Other lineage1.1.3 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4815556 RR-TB lineage3 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
ERR4817069 RR-TB None
ERR2229698 RR-TB lineage4.8 None