EBG00000313325 - n.426T>C
Drug resistance types
31 Sensitive
24 RR-TB
15 HR-TB
11 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
187 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 198 |
| lineage4 | 5 |
| lineage2.2.1 | 4 |
| lineage4.1.2.1 | 3 |
| lineage4.1.4 | 1 |
| lineage3 | 4 |
| La1.8.1 | 1 |
| La1.3 | 1 |
| La1.2 | 6 |
| La1.8.2 | 3 |
| lineage2.2.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.8 | 6 |
| lineage5.1.3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.2.2.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage4.3.2.1 | 3 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.5 | 1 |
| 5 | |
| lineage4.3.4.2.1 | 4 |
| lineage1.1.3.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.7 | 2 |
| lineage4.2.1.1 | 2 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 273 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR037234 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR1023527 | RR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR4423724 | RR-TB | lineage3 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769429 | Other | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR6149874 | Other | La1.8.2 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR6149870 | Other | La1.8.2 | None | ERR6149876 | Other | La1.8.2 | None | ERR6201802 | Other | La1.2 | None | ERR6198389 | Other | La1.2 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR6201843 | Other | La1.2 | None | ERR6201832 | Other | La1.2 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR751310 | Sensitive | lineage5.1.3 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | SRR10315603 | MDR-TB | lineage4.8 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR1196582 | Other | lineage4.9 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR13199734 | Other | La1.2 | None | SRR13861141 | HR-TB | lineage4.9 | None | SRR13861144 | Other | lineage4.9 | None | SRR13861157 | Other | lineage4.9 | None | SRR13861142 | Other | lineage4.9 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861143 | Other | lineage4.9 | None | SRR13861150 | Other | lineage4.9 | None | SRR13861156 | Other | lineage4.9 | None | SRR13861158 | Other | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | SRR13861161 | Other | lineage4.9 | None | SRR13861175 | Other | lineage4.9 | None | SRR13861179 | Other | lineage4.9 | None | SRR13861174 | Other | lineage4.9 | None | SRR13861183 | Other | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861195 | Other | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861187 | Other | lineage4.9 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861207 | Other | lineage4.9 | None | SRR13861206 | Other | lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | SRR13861213 | Other | lineage4.9 | None | SRR13861240 | HR-TB | lineage4.9 | None | SRR13861236 | RR-TB | lineage4.9 | None | SRR13861231 | Other | lineage4.9 | None | SRR13861230 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861243 | HR-TB | lineage4.9 | None | SRR13861248 | HR-TB | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861254 | Other | lineage4.9 | None | SRR13861258 | Other | lineage4.9 | None | SRR13861256 | Other | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861263 | Other | lineage4.9 | None | SRR13861280 | Other | lineage4.9 | None | SRR13861268 | Other | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861286 | Other | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861293 | Other | lineage4.9 | None | SRR13861299 | RR-TB | lineage4.9 | None | SRR13861307 | Other | lineage4.9 | None | SRR13861294 | Other | lineage4.9 | None | SRR13861297 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861318 | Other | lineage4.9 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861329 | Other | lineage4.9 | None | SRR13861330 | Other | lineage4.9 | None | SRR13861328 | Other | lineage4.9 | None | SRR13861343 | Other | lineage4.9 | None | SRR13861331 | Other | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861348 | Other | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | SRR13861369 | Other | lineage4.9 | None | SRR13861356 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861384 | HR-TB | lineage4.9 | None | SRR13861379 | Other | lineage4.9 | None | SRR13861383 | Other | lineage4.9 | None | SRR13861387 | Other | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861392 | Other | lineage4.9 | None | SRR13861411 | HR-TB | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR13861418 | HR-TB | lineage4.9 | None | SRR13861423 | Other | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861430 | Other | lineage4.9 | None | SRR13861429 | Other | lineage4.9 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861442 | Other | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861447 | RR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861453 | Other | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861459 | HR-TB | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861491 | RR-TB | lineage4.9 | None | SRR13861493 | HR-TB | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861497 | HR-TB | lineage4.9 | None | SRR13861499 | Other | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | SRR13861533 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861544 | Other | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR13861567 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861572 | Other | lineage4.9 | None | SRR13861569 | Other | lineage4.9 | None | SRR13861584 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861579 | Other | lineage4.9 | None | SRR13861587 | RR-TB | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861598 | Other | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861597 | Other | lineage4.9 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861593 | Other | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | SRR13861624 | Other | lineage4.9 | None | SRR13861642 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861639 | Other | lineage4.9 | None | SRR13861634 | HR-TB | lineage4.9 | None | SRR13861637 | Other | lineage4.9 | None | SRR13861641 | Other | lineage4.9 | None | SRR13861651 | Other | lineage4.9 | None | SRR13861648 | Other | lineage4.9 | None | SRR13861668 | Other | lineage4.9 | None | SRR13861654 | Other | lineage4.9 | None | SRR13861664 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR13861694 | Other | lineage4.9 | None | SRR13861673 | Other | lineage4.9 | None | SRR13861685 | Other | lineage4.9 | None | SRR13861669 | Other | lineage4.9 | None | SRR13861680 | Other | lineage4.9 | None | SRR13861692 | Other | lineage4.9 | None | SRR13861702 | Other | lineage4.9 | None | SRR13861711 | Other | lineage4.9 | None | SRR13861696 | Other | lineage4.9 | None | SRR13861706 | Other | lineage4.9 | None | SRR13861718 | Other | lineage4.9 | None | SRR13861710 | Other | lineage4.9 | None | SRR13861717 | Other | lineage4.9 | None | SRR13861714 | Other | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | SRR13861727 | Other | lineage4.9 | None | SRR13861734 | Other | lineage4.9 | None | SRR21764250 | Other | lineage4.9 | None | SRR19612366 | Other | lineage4.5 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR19576436 | Sensitive | None | SRR21676318 | Sensitive | lineage2.2.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR176771 | Sensitive | None | ERR190388 | Sensitive | lineage4.9 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | SRR3675230 | RR-TB | lineage3 | None | ERR181864 | Sensitive | lineage3.1.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR2229358 | Other | lineage4.8 | None | ERR2229033 | Other | lineage4.8 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR2229780 | Other | lineage4.9 | None | ERR2229336 | Other | lineage4.8 | None | ERR2229781 | Other | lineage4.9 | None | ERR1034791 | RR-TB | None | ERR2228859 | RR-TB | lineage4 | None | ERR221583 | Sensitive | lineage4.1.2 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR2513371 | Sensitive | lineage4.3.2.1 | gb | ERR2228888 | Other | lineage4.8 | None | SRR5341375 | Other | lineage4.9 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR6397441 | Other | lineage4 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | SRR6045124 | Other | lineage4.9 | None | SRR5341396 | Other | lineage4 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | SRR5341423 | Other | lineage1.1.2 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397642 | RR-TB | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR6152886 | HR-TB | lineage3 | None | SRR6152979 | Other | lineage4.7 | None | SRR6397721 | Other | lineage4.2.1.1 | None | SRR6153036 | Other | None | SRR7645834 | Other | lineage2.2.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6397770 | Other | lineage4.7 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR7131050 | MDR-TB | lineage4.3.3 | None | SRR6397771 | Other | lineage1.1.1.1 | None |
|---|
