EBG00000313325 - n.432C>G
Drug resistance types
52 Sensitive
11 RR-TB
59 HR-TB
40 MDR-TB
37 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.3 | 1 |
| lineage3 | 12 |
| lineage4.1.2.1 | 4 |
| lineage4.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.9 | 38 |
| lineage2.2.1 | 30 |
| lineage4.3.3 | 4 |
| 20 | |
| lineage4 | 6 |
| lineage4.3.4.1 | 2 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.4.1.1 | 10 |
| La1.8.1 | 3 |
| lineage4.3.4 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.2 | 2 |
| lineage5.1.1 | 3 |
| lineage1.1.1 | 1 |
| lineage6.2.1 | 1 |
| lineage2.2 | 23 |
| lineage5.1.2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage2.2.2 | 19 |
| lineage2.2.1.1 | 2 |
| lineage4.4.2 | 2 |
| lineage4;lineage2.2.2 | 1 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 3 |
| lineage4.9;lineage2 | 1 |
| lineage4.6.1 | 9 |
| lineage4.6.1.2 | 4 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage4.6.1.1 | 3 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.6.1;lineage3.1 | 1 |
| lineage3;lineage2.2 | 1 |
| lineage1.2.2.2 | 3 |
| lineage1.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.9;lineage4.3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9.1 | 1 |
| lineage4.6 | 1 |
| lineage4.6.5 | 1 |
| lineage4.6.3 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 236 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046442 | Other | lineage3 | None | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR4829692 | Sensitive | lineage4.1.2.1 | None | ERR4829728 | MDR-TB | lineage4.2.1 | it | ERR4829238 | Sensitive | lineage3 | None | ERR4831633 | RR-TB | lineage4.9;lineage2.2 | None | SRR6046815 | Other | lineage3 | None | ERR4831631 | HR-TB | lineage4.9 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7131160 | Sensitive | lineage3 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323068 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796630 | HR-TB | None | ERR10796627 | Other | lineage4 | None | ERR3283009 | Other | La1.8.1 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR144568 | Pre-XDR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3283015 | Sensitive | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3797024 | Other | lineage4.9 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR473308 | HR-TB | lineage4.3.4.2.1 | None | ERR473279 | Other | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769503 | Other | La1.2 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR736837 | Other | lineage4.9 | None | ERR751332 | Sensitive | lineage6.2.1 | None | ERR751336 | Sensitive | lineage5.1.1 | None | ERR751338 | Other | lineage5.1.1 | None | SRR1013527 | RR-TB | lineage2.2 | None | ERR751339 | Sensitive | lineage5.1.2 | None | SRR1003105 | Pre-XDR-TB | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013599 | HR-TB | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013618 | MDR-TB | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048983 | HR-TB | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | SRR1049041 | MDR-TB | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049723 | MDR-TB | lineage4.6.1 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1049724 | MDR-TB | lineage4.6.1 | None | SRR1049743 | Sensitive | lineage4.6.1 | None | SRR1049744 | Sensitive | lineage4.6.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062902 | MDR-TB | lineage4.4.1.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1062927 | MDR-TB | lineage4.6.1 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR1106670 | Other | lineage4.9 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140740 | RR-TB | lineage4.6.1.2 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1791910 | Other | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR13199734 | Other | La1.2 | None | ERR176771 | Sensitive | None | SRR3105762 | HR-TB | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | ERR2446544 | Sensitive | lineage3 | nl | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR1750881 | Sensitive | lineage4.1.1.3 | zw | ERR181864 | Sensitive | lineage3.1.1 | None | SAMN02381037 | MDR-TB | lineage4.6.1 | None | ERR190388 | Sensitive | lineage4.9 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR192070 | Other | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR3275548 | Sensitive | lineage3 | nl | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | ERR4817102 | Sensitive | None | ERR216901 | Other | lineage3.1.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR216928 | Other | lineage4.9.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034791 | RR-TB | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR2510807 | Other | lineage4.6 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | ERR4818444 | Other | lineage4.6.5 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR245790 | Sensitive | None | ERR4819430 | Sensitive | lineage4.1.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4820537 | HR-TB | lineage1.2.2.2 | None | ERR4820524 | Sensitive | lineage4.9 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR2517457 | Sensitive | lineage3 | None | SRR6046152 | Other | lineage4.9 | None | ERR2747615 | Sensitive | lineage4.9 | None | SRR6046189 | Other | lineage4.8 | None |
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