EBG00000313325 - n.567A>C
Drug resistance types
35 Sensitive
16 RR-TB
17 HR-TB
23 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| 12 | |
| lineage4.9 | 39 |
| lineage4.1.2.1 | 6 |
| lineage4 | 7 |
| lineage2.2.1 | 9 |
| lineage4;lineage3.1 | 1 |
| lineage1.1.2 | 2 |
| La1.8.2 | 2 |
| La1.2 | 2 |
| lineage4.1.2 | 4 |
| lineage5.1.1 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.6.1.1 | 5 |
| lineage4.6.1 | 8 |
| lineage4.4.1.1 | 6 |
| lineage4.6.1.2 | 5 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage2.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.6.1;lineage3.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3 | 4 |
| lineage2 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| La1.8.1 | 3 |
| lineage4.9.1 | 2 |
| lineage4.8 | 6 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.6 | 2 |
| lineage3.1.1 | 2 |
| lineage4.4 | 1 |
| lineage6.1.3 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.7 | 2 |
| lineage4.3.3 | 3 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | 1 |
| lineage4.3.4.2.1;lineage1.1.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 165 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR144568 | Pre-XDR-TB | None | ERR405190 | Sensitive | lineage4.9 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR405191 | Other | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR473279 | Other | lineage4.9 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769429 | Other | lineage4.9 | None | ERR5979787 | Other | lineage4.9 | None | ERR6140667 | Other | La1.8.2 | None | ERR5979784 | Sensitive | lineage4.9 | None | ERR6201802 | Other | La1.2 | None | ERR6149874 | Other | La1.8.2 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR6201843 | Other | La1.2 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR751338 | Other | lineage5.1.1 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | SRR1049031 | HR-TB | lineage4.9 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1049723 | MDR-TB | lineage4.6.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR1049724 | MDR-TB | lineage4.6.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1062927 | MDR-TB | lineage4.6.1 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1140740 | RR-TB | lineage4.6.1.2 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR11972157 | MDR-TB | lineage2.2.1 | None | SRR11972170 | HR-TB | lineage3 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR124451 | HR-TB | None | SRR15368973 | Other | None | SRR124453 | HR-TB | None | SRR13861312 | Other | lineage4.9 | None | SRR13861438 | Other | lineage4.9 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR13861164 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR1791940 | Other | La1.8.1 | None | SAMN02381037 | MDR-TB | lineage4.6.1 | None | SRR22048375 | Other | lineage4.1.2.1 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR21728339 | Other | lineage3 | None | SRR3105762 | HR-TB | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | ERR2229033 | Other | lineage4.8 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR192070 | Other | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR245790 | Sensitive | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR2229358 | Other | lineage4.8 | None | ERR2228888 | Other | lineage4.8 | None | ERR2510807 | Other | lineage4.6 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR1034791 | RR-TB | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR2229780 | Other | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR2228822 | Other | lineage4.9 | None | ERR2228859 | RR-TB | lineage4 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | SRR5341460 | Other | lineage3 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | SRR5341429 | HR-TB | lineage3.1.2.1 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | SRR5341467 | Other | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR1873459 | Pre-XDR-TB | lineage4.4.1.1 | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | SRR5431794 | Other | La1.8.1 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045379 | Other | None | SRR6045289 | Other | None | ERR2851371 | Other | lineage4.9 | None | SRR6152979 | Other | lineage4.7 | None | ERR4829634 | Sensitive | lineage4.3.3 | it | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6397441 | Other | lineage4 | None | ERR4829196 | Other | lineage4.1.2 | None | ERR4830705 | Sensitive | lineage4.1.2.1 | dz | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6397642 | RR-TB | None | SRR6397770 | Other | lineage4.7 | None | SRR6397727 | Other | lineage4.2.1.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | SRR7645834 | Other | lineage2.2.1 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR024351 | MDR-TB | lineage2.2.1 | None | ERR036185 | MDR-TB | lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR036215 | Other | lineage4.8 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR036224 | HR-TB | lineage4.3.4.2.1;lineage1.1.3 | None | ERR10796568 | Other | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1023527 | RR-TB | lineage4 | None | ERR10796629 | Other | lineage4 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR10796630 | HR-TB | None |
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