EBG00000313339 - n.1302C>T
Drug resistance types
7 Sensitive
4 RR-TB
44 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 2 |
| lineage4.1.2.1 | 13 |
| lineage4.3.4.1 | 1 |
| lineage4.6.4 | 2 |
| 31 | |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.3 | 2 |
| lineage2.2.2 | 2 |
| lineage4.5 | 1 |
| lineage4.9 | 7 |
| lineage1.2.1.2.1 | 1 |
| La1.8.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage3 | 12 |
| lineage2.2.1 | 4 |
| lineage4.1 | 1 |
| lineage4.3.3 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4 | 1 |
| lineage4.1.1 | 1 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 94 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR6358837 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9787120 | Other | lineage6.1.3 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13837643 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR11081088 | Sensitive | lineage3 | None | SRR18911980 | Sensitive | lineage2.2.2 | None | SRR20969681 | RR-TB | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815310 | Other | None | ERR4813861 | Other | lineage4.3.3 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4815550 | Other | lineage4 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR3275220 | Other | lineage3 | nl | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR2517058 | Sensitive | lineage3 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2516869 | HR-TB | lineage3 | None | ERR2516776 | HR-TB | lineage3 | None | ERR2693239 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR2446144 | Other | lineage3 | nl | SRR6045952 | HR-TB | None | ERR2516873 | Sensitive | lineage3 | gb | SRR6325444 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | ERR2517034 | Other | lineage3 | gb | ERR2516919 | HR-TB | lineage3 | gb | ERR2516855 | Sensitive | lineage3 | gb | ERR2517048 | Sensitive | lineage3 | gb | SRR6325447 | HR-TB | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR3468544 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR3803981 | Other | lineage6.1.3 | None |
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