EBG00000313339 - n.22T>C
Drug resistance types
36 Sensitive
4 RR-TB
18 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 41 |
| lineage4.8 | 2 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2;lineage4.9 | 1 |
| lineage3 | 3 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage2.2.1 | 5 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4 | 2 |
| lineage4.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 73 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11342669 | Other | lineage4.8 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR1175487 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None |
|---|
