Rv0005 - c.1302C>T


Drug resistance types
15 Sensitive 2 RR-TB 14 HR-TB 14 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 21 Other
lineage Counts
lineage Count
lineage4.1.2.1 12
lineage4.9 8
lineage4.2;lineage4.8.1;lineage4.9 2
lineage6.1.2 1
lineage4.6.2.2 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2;lineage4.9 2
La1.7;lineage4.9 2
5
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.3 2
lineage2.1;lineage4.9;lineage6.3 5
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage6.1.3 1
lineage2.2 2
lineage3 2
lineage2.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage4.9 1
lineage4.1.1.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.8 1
La3;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 66
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11081595 Sensitive lineage4.1.2.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR11049377 Sensitive lineage4.1.2.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR552969 Sensitive lineage4.1.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786604 Other None
ERR736872 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SAMEA2535040 Sensitive lineage4.1.2.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR7496472 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR551665 Sensitive lineage4.1.2.1 cg
ERR234175 Sensitive lineage4.1.2.1 de
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR551666 Sensitive lineage4.1.2.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR11082160 Sensitive lineage4.1.2.1 None
ERR3283021 MDR-TB lineage4.9 None
ERR9786843 Other None
SRR6789626 Other None
ERR4810624 MDR-TB lineage2.2 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR228218 Sensitive lineage3 None
ERR702406 Other lineage2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR369161 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4831159 Sensitive lineage4.1.2.1 de
ERR736867 Other lineage2.1;lineage4.9 None
ERR11049727 Sensitive lineage4.1.2.1 None
ERR11465024 Other lineage4.1.1.3 None
SRR5341456 Other lineage4.9 None
ERR9786671 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR552968 Sensitive lineage4.1.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR2100572 Sensitive lineage3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR028319 Sensitive lineage4.1.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None