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SRA data
Rv0005
- c.1302C>T
Drug resistance types
15 Sensitive
2 RR-TB
18 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.2.1
12
lineage4.9
8
5
lineage2.1;lineage4.9;lineage6.3
4
lineage4.6.2.2
3
lineage4.2;lineage4.8.1;lineage4.9
2
lineage4.2;lineage4.9
2
La1.7;lineage4.9
2
lineage4.9;lineage6.3
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
67
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR028319
Sensitive
lineage4.1.2.1
None
ERR11049377
Sensitive
lineage4.1.2.1
None
ERR11049727
Sensitive
lineage4.1.2.1
None
ERR11081595
Sensitive
lineage4.1.2.1
None
ERR11082160
Sensitive
lineage4.1.2.1
None
ERR11465024
Other
lineage4.1.1.3
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR176560
HR-TB
La1.7;lineage4.9
None
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