lineage | Count |
---|---|
lineage2.2 | 4 |
75 | |
lineage5.2 | 2 |
lineage4.6.2.2 | 3 |
lineage6 | 1 |
lineage4.1.1 | 1 |
lineage2.2.1 | 4 |
lineage4 | 11 |
La3 | 1 |
lineage4.3.4.1 | 1 |
lineage4.5 | 1 |
lineage4.9;La3 | 1 |
lineage4.8 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.1 | 1 |
lineage4.3 | 1 |
lineage4.9 | 4 |
La1.8.1 | 1 |
lineage3 | 1 |
lineage2 | 1 |
lineage4.6.1.1 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119669 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR10808805 | Sensitive | None | ERR9786604 | Other | None | ERR9786671 | Other | None | ERR9786843 | Other | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9787197 | Other | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR14801749 | Sensitive | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR15368973 | Other | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR18714862 | Sensitive | lineage4.8 | None | SRR3675465 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675221 | HR-TB | None | ERR181744 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675236 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR181887 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212033 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | SRR7496472 | Other | None | SRR6045555 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044790 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6046299 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046460 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046540 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR5311099 | HR-TB | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | SRR8600047 | Other | La1.8.1 | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR1063862 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283027 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3445503 | HR-TB | None | ERR5336148 | Other | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR4800341 | Other | lineage3 | None | ERR4769521 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736848 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None |
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