Rv0407 - p.Thr302Lys
Drug resistance types
13 Sensitive
1 RR-TB
58 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| 78 | |
| lineage3.1.3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.9 | 5 |
| lineage4 | 15 |
| lineage2.2 | 7 |
| lineage2.2.1 | 3 |
| lineage4.1 | 1 |
| lineage3 | 1 |
| lineage2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.5 | 1 |
| lineage1.1.2 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.8;La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341333 | HR-TB | None | ERR257890 | Sensitive | lineage3.1.3 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6044790 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6046397 | Other | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046540 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR7496509 | Other | None | ERR502532 | HR-TB | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR3797069 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283036 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4188247 | HR-TB | None | ERR5336148 | Other | None | ERR4769452 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR6866410 | Sensitive | None | ERR702406 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117709 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786671 | Other | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1169306 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172234 | Other | None | SRR1172857 | MDR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184294 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972226 | Sensitive | lineage1.1.3.1 | None | SRR12142341 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR14801749 | Sensitive | None | SRR19303884 | HR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR25827682 | Other | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675270 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4817060 | RR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341302 | HR-TB | None | SRR3675311 | Other | None | ERR2229109 | Sensitive | lineage4.8 | None | SRR3675572 | Other | None | ERR4816585 | Other | lineage2.2 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR2514692 | Other | None |
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