Rv0668 - c.2701C>T
Drug resistance types
126 Sensitive
3 RR-TB
120 HR-TB
21 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 279 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.1;lineage4.3.4.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 4 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 300 |
Geographic prevalence
Country level data for this variant is available for 76 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR24827293 | MDR-TB | lineage4.1.1.1 | None | SRR6397922 | HR-TB | lineage4.1.1.1 | ca | SRR6397345 | HR-TB | lineage4.1.1.1 | ca | ERR10680149 | MDR-TB | lineage4.1.1.1 | None | SRR26112565 | Sensitive | lineage4.1.1.1 | None | SRR16370654 | Sensitive | lineage4.1.1.1 | None | ERR1274677 | HR-TB | lineage4.1.1.1 | None | ERR1274667 | HR-TB | lineage4.1.1.1 | None | SRR19233762 | Sensitive | lineage4.1.1.1 | None | SRR21675853 | Other | lineage4.1.1.1 | None | ERR4818958 | Sensitive | lineage4.1.1.1 | gb | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR1274702 | HR-TB | lineage4.1.1.1 | None | ERR4800101 | MDR-TB | lineage4.1.1.1 | None | ERR9121471 | Sensitive | lineage4.1.1.1 | None | ERR9029875 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | SRR6397689 | HR-TB | lineage4.1.1.1 | ca | SRR3725698 | Sensitive | lineage4.1.1.1 | None | ERR10680091 | MDR-TB | lineage4.1.1.1 | None | ERR1274718 | HR-TB | lineage4.1.1.1 | None | SRR6397350 | HR-TB | lineage4.1.1.1 | ca | ERR4816220 | Sensitive | lineage4.1.1.1 | gb | ERR1274703 | HR-TB | lineage4.1.1.1 | None | SRR6398102 | HR-TB | lineage4.1.1.1 | ca | ERR9786149 | Sensitive | lineage4.1.1.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR18909910 | Other | lineage4.1.1.1 | None | SRR16370694 | Sensitive | lineage4.1.1.1 | None | SRR26112520 | Sensitive | lineage4.1.1.1 | None | SRR6398048 | HR-TB | lineage4.1.1.1 | ca | SRR16370599 | Sensitive | lineage4.1.1.1 | None | ERR4822057 | Sensitive | lineage4.1.1.1 | None | SRR19317569 | Sensitive | lineage4.1.1.1 | None | SRR6398032 | HR-TB | lineage4.1.1.1 | ca | SRR16097558 | Sensitive | lineage4.1.1.1 | None | SRR22249886 | Sensitive | lineage4.1.1.1 | None | SRR21677258 | Other | lineage4.1.1.1 | None | ERR1274673 | HR-TB | lineage4.1.1.1 | None | SRR2100386 | HR-TB | lineage4.1.1.1 | None | SRR21677265 | Other | lineage4.1.1.1 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR26112522 | Sensitive | lineage4.1.1.1 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR16089677 | Sensitive | lineage4.1.1.1 | None | SRR6397670 | HR-TB | lineage4.1.1.1 | ca | ERR4820273 | Sensitive | lineage4.1.1.1 | gb | ERR1274661 | HR-TB | lineage4.1.1.1 | None | ERR234268 | Sensitive | lineage4.1.1.1 | us | ERR1274697 | HR-TB | lineage4.1.1.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR6398033 | HR-TB | lineage4.1.1.1 | ca | SRR21676937 | Sensitive | lineage4.1.1.1 | None | SRR6397924 | HR-TB | lineage4.1.1.1 | ca | SRR28558429 | Sensitive | lineage4.1.1.1 | None | SRR28683948 | HR-TB | lineage4.1.1.1 | None | SRR28514692 | HR-TB | lineage4.1.1.1 | None | SRR28409624 | Sensitive | lineage4.1.1.1 | None | ERR2512471 | Sensitive | lineage4.1.1.1 | gb | SRR7070447 | Sensitive | lineage4.1.1.1 | None | SRR24827307 | HR-TB | lineage4.1.1.1 | None | ERR8975590 | HR-TB | lineage4.1.1.1 | None | ERR551725 | Sensitive | lineage4.1.1.1 | None | SRR18909922 | MDR-TB | lineage4.1.1.1 | None | ERR8686196 | Sensitive | lineage4.1.1.1 | None | ERR7911460 | Sensitive | lineage4.1.1.1 | za | ERR4815309 | Sensitive | lineage4.1.1.1 | None | SRR18911242 | Other | lineage4.1.1.1 | None | SRR6397915 | HR-TB | lineage4.1.1.1 | ca | SRR21686611 | Sensitive | lineage4.1.1.1 | None | ERR1274663 | HR-TB | lineage4.1.1.1 | None | ERR1274687 | HR-TB | lineage4.1.1.1 | None | ERR2513822 | Sensitive | lineage4.1.1.1 | gb | ERR1274713 | HR-TB | lineage4.1.1.1 | None | ERR1274657 | HR-TB | lineage4.1.1.1 | None | ERR4818780 | Sensitive | lineage4.1.1.1 | None | SRR6398134 | HR-TB | lineage4.1.1.1 | ca | ERR1274695 | HR-TB | lineage4.1.1.1 | None | SRR21710582 | Other | lineage4.1.1.1 | None | SRR9613549 | Sensitive | lineage4.1.1.1 | None | SAMEA5569694 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | ERR4818864 | Sensitive | lineage4.1.1.1 | gb | SRR6398025 | HR-TB | lineage4.1.1.1 | ca | ERR4816252 | Sensitive | lineage4.1.1.1 | gb | ERR9117746 | Sensitive | lineage4.1.1.1 | None | ERR4819402 | Sensitive | lineage4.1.1.1 | gb | SRR7070102 | Sensitive | lineage4.1.1.1 | None | ERR8975881 | Sensitive | lineage4.1.1.1 | None | ERR4816704 | Sensitive | lineage4.1.1.1 | gb | ERR2515880 | Sensitive | lineage4.1.1.1 | None | ERR1274660 | HR-TB | lineage4.1.1.1 | None | SRR24799205 | Sensitive | lineage4.1.1.1 | None | SRR6397534 | HR-TB | lineage4.1.1.1 | ca | ERR4821125 | Sensitive | lineage4.1.1.1 | gb | SRR22251786 | Sensitive | lineage4.1.1.1 | None | SRR6397539 | HR-TB | lineage4.1.1.1 | ca | SRR6398064 | HR-TB | lineage4.1.1.1 | ca | ERR4819947 | Sensitive | lineage4.1.1.1 | None | SRR6397522 | HR-TB | lineage4.1.1.1 | ca | ERR2652915 | Other | lineage4.1.1.1 | None | SRR7069019 | Sensitive | lineage4.1.1.1 | None | SRR18914028 | Sensitive | lineage4.1.1.1 | None | ERR1274708 | HR-TB | lineage4.1.1.1 | None | ERR1274684 | HR-TB | lineage4.1.1.1 | None | ERR4821906 | Sensitive | lineage4.1.1.1 | None | ERR8699835 | Sensitive | lineage4.1.1.1 | None | SRR6397510 | HR-TB | lineage4.1.1.1 | ca | ERR1274716 | HR-TB | lineage4.1.1.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR2446566 | Other | lineage4.9 | None | SRR18912548 | Sensitive | lineage4.1.1.1 | None | ERR4815302 | Sensitive | lineage4.1.1.1 | None | ERR10748532 | Sensitive | lineage4.1.1.1 | None | SRR6398044 | HR-TB | lineage4.1.1.1 | ca | SRR19267905 | Sensitive | lineage4.1.1.1 | None | ERR9125918 | Sensitive | lineage4.1.1.1 | None | SRR16370651 | Sensitive | lineage4.1.1.1 | None | SRR22251901 | Sensitive | lineage4.1.1.1 | None | SRR6397759 | HR-TB | lineage4.1.1.1 | ca | ERR108154 | Sensitive | lineage4.1.1.1 | za | ERR1274662 | HR-TB | lineage4.1.1.1 | None | ERR1274688 | HR-TB | lineage4.1.1.1 | None | SRR21677070 | Other | lineage4.1.1.1 | None | SRR21677871 | Sensitive | lineage4.1.1.1 | None | ERR114497 | HR-TB | lineage4.1.1.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR21708945 | Other | lineage4.1.1.1 | None | SRR13392109 | HR-TB | lineage4.1.1.1 | None | SRR7069852 | Sensitive | lineage4.1.1.1 | None | ERR4821861 | Sensitive | lineage4.1.1.1 | None | ERR1274685 | HR-TB | lineage4.1.1.1 | None | SRR2100344 | HR-TB | lineage4.1.1.1 | None | ERR4818529 | Sensitive | lineage4.1.1.1 | None | ERR1274655 | HR-TB | lineage4.1.1.1 | None | ERR4816073 | Sensitive | lineage4.1.1.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4814932 | Other | lineage4.1.1.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR6397967 | HR-TB | lineage4.1.1.1 | ca | ERR2514218 | Sensitive | lineage4.1.1.1 | gb | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR4820574 | Sensitive | lineage4.1.1.1 | gb | ERR4815953 | Sensitive | lineage4.1.1.1 | None | SRR7070302 | Sensitive | lineage4.1.1.1 | None | ERR4819101 | Sensitive | lineage4.1.1.1 | gb | SRR6397570 | HR-TB | lineage4.1.1.1 | ca | ERR2513969 | Sensitive | lineage4.1.1.1 | gb | SRR6397712 | HR-TB | lineage4.1.1.1 | ca | ERR4820249 | Sensitive | lineage4.1.1.1 | None | ERR4817133 | Sensitive | lineage4.1.1.1 | None | SRR6398001 | HR-TB | lineage4.1.1.1 | ca | SRR6397735 | HR-TB | lineage4.1.1.1 | ca | SRR6397799 | HR-TB | lineage4.1.1.1 | ca | ERR11068181 | HR-TB | lineage4.1.1.1 | None | SRR13180431 | Sensitive | lineage4.1.1.1 | None | SRR26112004 | Sensitive | lineage4.1.1.1 | None | SRR28381186 | HR-TB | lineage4.1.1.1 | None | SRR28045121 | Sensitive | lineage4.1.1.1 | None | SRR28514690 | HR-TB | lineage4.1.1.1 | None | SRR28514693 | Sensitive | lineage4.1.1.1 | None | SRR28170705 | Other | lineage4.1.1.1 | None | SRR28514694 | Other | lineage4.1.1.1 | None | SRR6896173 | Sensitive | lineage4.1.1.1 | None | SRR27450326 | Sensitive | lineage4.1.1.1 | None | ERR1274711 | HR-TB | lineage4.1.1.1 | None | SRR16370252 | Sensitive | lineage4.1.1.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR1274659 | HR-TB | lineage4.1.1.1 | None | ERR4815708 | Sensitive | lineage4.1.1.1 | gb | SRR7069221 | Sensitive | lineage4.1.1.1 | None | SRR16058713 | Sensitive | lineage4.1.1.1 | None | SRR16370409 | HR-TB | lineage4.1.1.1 | None | SRR6397723 | HR-TB | lineage4.1.1.1 | ca | SRR6153190 | Sensitive | lineage4.1.1.1 | ca | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4822093 | Sensitive | lineage4.1.1.1 | None | ERR10680066 | RR-TB | lineage4.1.1.1 | None | SRR6397993 | HR-TB | lineage4.1.1.1 | ca | ERR4815333 | Sensitive | lineage4.1.1.1 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR7069055 | Sensitive | lineage4.1.1.1 | None | SRR19221469 | Sensitive | lineage4.1.1.1 | None | SRR6398123 | HR-TB | lineage4.1.1.1 | ca | ERR1274658 | HR-TB | lineage4.1.1.1 | None | ERR117736 | HR-TB | lineage4.1.1.1 | None | SRR21678379 | Other | lineage4.1.1.1 | None | SRR19325683 | Other | lineage4.1.1.1 | None | SRR6397487 | HR-TB | lineage4.1.1.1 | ca | ERR1274700 | HR-TB | lineage4.1.1.1 | None | ERR4816203 | Sensitive | lineage4.1.1.1 | None | ERR2514899 | Sensitive | lineage4.1.1.1 | gb | ERR1274672 | HR-TB | lineage4.1.1.1 | None | ERR4815406 | Sensitive | lineage4.1.1.1 | None | SRR6855729 | Sensitive | lineage4.1.1.1 | None | SRR6397998 | HR-TB | lineage4.1.1.1 | ca | ERR1274665 | HR-TB | lineage4.1.1.1 | None | ERR1274705 | HR-TB | lineage4.1.1.1 | None | SRR6152644 | HR-TB | lineage4.1.1.1 | ca | ERR4816535 | Sensitive | lineage4.1.1.1 | None | ERR031457 | Sensitive | lineage4.1.1.1 | None | SRR16370648 | HR-TB | lineage4.1.1.1 | None | SRR21677074 | Other | lineage4.1.1.1 | None | ERR4195498 | Sensitive | lineage4.1.1.1 | None | SRR6397531 | HR-TB | lineage4.1.1.1 | ca | SRR6397523 | HR-TB | lineage4.1.1.1 | ca | SRR16099295 | HR-TB | lineage4.1.1.1 | None | SRR19267902 | Sensitive | lineage4.1.1.1 | None | SRR2101313 | Sensitive | lineage4.1.1.1 | None | SRR21659036 | Sensitive | lineage4.1.1.1 | None | SRR6398103 | HR-TB | lineage4.1.1.1 | ca | SRR6397529 | HR-TB | lineage4.1.1.1 | ca | SRR6397928 | HR-TB | lineage4.1.1.1 | ca | SRR6397757 | HR-TB | lineage4.1.1.1 | ca | ERR8975536 | Sensitive | lineage4.1.1.1 | None | SRR6397984 | HR-TB | lineage4.1.1.1 | ca | SRR13180357 | Sensitive | lineage4.1.1.1 | None | ERR1274678 | HR-TB | lineage4.1.1.1 | None | ERR1274691 | HR-TB | lineage4.1.1.1 | None | SRR3724926 | Sensitive | lineage4.1.1.1 | None | ERR4820217 | Sensitive | lineage4.1.1.1 | gb | SRR6398029 | HR-TB | lineage4.1.1.1 | ca | ERR11043397 | Sensitive | lineage4.1.1.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR6397452 | HR-TB | lineage4.1.1.1 | ca | SRR21685093 | Sensitive | lineage4.1.1.1 | None | ERR8975970 | Sensitive | lineage4.1.1.1 | None | ERR1274671 | HR-TB | lineage4.1.1.1 | None | SRR19317578 | Sensitive | lineage4.1.1.1 | None | SRR19267904 | Sensitive | lineage4.1.1.1 | None | SRR13392110 | HR-TB | lineage4.1.1.1 | None | SRR21658643 | Other | lineage4.1.1.1 | None | SRR24827302 | HR-TB | lineage4.1.1.1 | None | SRR7070314 | Sensitive | lineage4.1.1.1 | None | ERR1274701 | HR-TB | lineage4.1.1.1 | None | SRR7069753 | Sensitive | lineage4.1.1.1 | None | ERR1274714 | HR-TB | lineage4.1.1.1 | None | ERR4818294 | Sensitive | lineage4.1.1.1 | gb | SRR12416840 | MDR-TB | lineage4.9 | None | ERR1274656 | HR-TB | lineage4.1.1.1 | None | ERR1274707 | HR-TB | lineage4.1.1.1 | None | ERR2652921 | Other | lineage4.1.1.1 | None | SRR8758893 | MDR-TB | lineage4.1.1.1 | None | ERR4809166 | RR-TB | lineage4.1.1.1 | za | SRR19315447 | Sensitive | lineage4.1.1.1 | None | ERR1274676 | HR-TB | lineage4.1.1.1 | None | SRR7070232 | Sensitive | lineage4.1.1.1 | None | SRR6398084 | HR-TB | lineage4.1.1.1 | ca | SRR7070286 | Sensitive | lineage4.1.1.1 | None | ERR8686155 | Sensitive | lineage4.1.1.1 | None | SRR6797685 | Sensitive | lineage4.1.1.1 | None | SRR26112339 | Other | lineage4.1.1.1 | None | ERR4821209 | Sensitive | lineage4.1.1.1 | None | SRR6397996 | HR-TB | lineage4.1.1.1 | ca | SRR6398110 | HR-TB | lineage4.1.1.1 | ca | SRR28409449 | Sensitive | lineage4.1.1.1 | None | SRR28045453 | Sensitive | lineage4.1.1.1 | None | ERR1274680 | HR-TB | lineage4.1.1.1 | None | ERR1274696 | HR-TB | lineage4.1.1.1 | None | SRR21689540 | Sensitive | lineage4.1.1.1 | None | SRR19318142 | HR-TB | lineage4.1.1.1 | None | SRR16370653 | Sensitive | lineage4.1.1.1 | None | ERR4817342 | Other | lineage4.1.1.1 | None | ERR1274717 | HR-TB | lineage4.1.1.1 | None | SRR6398124 | HR-TB | lineage4.1.1.1 | ca | SRR5341330 | Other | lineage4.9 | None | SRR6397979 | HR-TB | lineage4.1.1.1 | None | ERR4820248 | Sensitive | lineage4.1.1.1 | None | SRR6397786 | HR-TB | lineage4.1.1.1 | ca | ERR1274670 | HR-TB | lineage4.1.1.1 | None | ERR4816340 | Sensitive | lineage4.1.1.1 | None | SRR6398114 | HR-TB | lineage4.1.1.1 | ca | SRR6398105 | HR-TB | lineage4.1.1.1 | ca | SRR16089897 | Sensitive | lineage4.1.1.1 | None | ERR1274712 | HR-TB | lineage4.1.1.1 | None | ERR1274669 | HR-TB | lineage4.1.1.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6397513 | HR-TB | lineage4.1.1.1 | ca | ERR4815316 | Sensitive | lineage4.1.1.1 | None | ERR4820040 | Sensitive | lineage4.1.1.1 | gb | SRR7070096 | Sensitive | lineage4.1.1.1 | None | ERR4819190 | Sensitive | lineage4.1.1.1 | None | SRR21727898 | Sensitive | lineage4.1.1.1 | None | ERR2652920 | Other | lineage4.1.1.1 | None | ERR4818650 | Sensitive | lineage4.1.1.1 | gb | SRR19314702 | HR-TB | lineage4.1.1.1 | None | SRR6397593 | HR-TB | lineage4.1.1.1 | ca | SRR18911984 | Other | lineage4.1.1.1 | None | SRR19128045 | HR-TB | lineage4.1.1.1 | None | SRR21710671 | Other | lineage4.1.1.1 | None | SRR26112162 | Other | lineage4.1.1.1 | None | ERR2652922 | Other | lineage4.1.1.1 | None | SRR6397347 | HR-TB | lineage4.1.1.1 | ca | ERR1274704 | HR-TB | lineage4.1.1.1 | None | ERR1274710 | HR-TB | lineage4.1.1.1 | None | ERR4816238 | Sensitive | lineage4.1.1.1 | None | ERR1274690 | HR-TB | lineage4.1.1.1 | None | ERR2652918 | Other | lineage4.1.1.1 | None | ERR1274664 | HR-TB | lineage4.1.1.1 | None | SRR21728717 | Other | lineage4.1.1.1 | None |
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