lineage | Count |
---|---|
lineage4.3.2.1 | 1 |
lineage4 | 36 |
lineage2.2.1 | 6 |
34 | |
La1.2 | 1 |
lineage4.6.2.2 | 2 |
lineage2.2 | 7 |
lineage4.8;lineage4.1 | 1 |
lineage4.9 | 5 |
lineage2.2.1.2 | 2 |
lineage9;lineage3.1 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 97 |
ID | Drug resistance | Lineage | Country iso2 | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1023525 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR4024991 | Other | None | ERR4769450 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR1158918 | Sensitive | lineage4 | None | ERR9786843 | Other | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR14801749 | Sensitive | None | SRR1183049 | Other | lineage2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675270 | HR-TB | None | ERR176778 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR6045450 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR5535933 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6046492 | Other | None | ERR4831117 | HR-TB | None | SRR6045399 | Other | None | SRR6046397 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None |
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