Rv1854c - c.984T>C
Drug resistance types
0 Sensitive
0 RR-TB
69 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 1 |
| 70 | |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2.1 | 5 |
| lineage4.9 | 3 |
| lineage4.1.2.1 | 3 |
| lineage1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 1 |
| La1 | 1 |
| lineage4.3.2 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675465 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212121 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | SRR6045555 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045399 | Other | None | SRR6046397 | Other | None | SRR6325442 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6325447 | HR-TB | None | ERR4829827 | Pre-XDR-TB | lineage2.2.1 | it | ERR2510707 | MDR-TB | lineage2.2.1 | it | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323038 | HR-TB | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR3283027 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3797014 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR4188350 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797083 | HR-TB | None | ERR3797061 | Other | None | ERR4810741 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6358837 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR736867 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR12416824 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR13861322 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | ERR4815604 | HR-TB | None |
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