Rv3696c - c.1215C>T


Drug resistance types
7 Sensitive 8 RR-TB 27 HR-TB 20 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 20 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 4
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage2.1;lineage4.9 20
lineage4.3.1;lineage4.9;lineage6 1
M.canetti;lineage2.2 3
lineage4.3.2 4
La3;lineage4.9 2
lineage4.1.2.1 2
La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
3
lineage4.1;lineage4.8 1
La1.8.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage4.3.4.2.1 1
lineage3 1
lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage4.9 10
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.2.1 2
lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage4.9;lineage6.1.3 1
La2;lineage2.2 1
lineage2.1;lineage4.3.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage4.9 1
spoligotype Counts
spoligotype Count
None 85
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR9121774 Sensitive lineage4.3.2 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9121785 Sensitive lineage4.3.2 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR212001 HR-TB None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1640750 Other None
ERR3797023 HR-TB La1.8.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4195408 Sensitive lineage4.3.2 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9896144 Other lineage3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4195637 Sensitive lineage4.3.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1791696 Other La1.8.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR752264 Other lineage2.2.1 th
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675243 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3468607 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR3797083 RR-TB lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1162864 Other lineage4.1.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None