Rv3696c - c.573T>G


Drug resistance types
13 Sensitive 3 RR-TB 5 HR-TB 88 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 9 Other
lineage Counts
lineage Count
lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
La1.2.BCG 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La2;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage2.2.1.1 1
lineage2.2.2 4
M.canetti;lineage2.1;lineage4.9 16
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7;lineage4.9 2
La1.8.1 6
lineage2.1;lineage4.9 2
lineage2.1;lineage2.2;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.9 12
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.9 6
M.canetti;lineage2.2 1
La2 3
lineage4.9;lineage9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.6.1.1 4
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage4.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage1;lineage4.9 1
lineage1.1.3.1 2
lineage4.1.1.3 1
lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.1;lineage4.3.2 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.3.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage1.1.1.1 2
lineage2.2.1 2
lineage1.1.3.1;lineage4.3.3 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 120
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR766220 Other La1.2.BCG None
ERR766220 Other La1.2.BCG None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1181091 Other lineage2.2.1.1 None
SRR25515185 MDR-TB lineage2.2.2 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR1792026 Other La1.8.1 None
SRR1792026 Other La1.8.1 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR21887643 MDR-TB lineage2.2.2 None
SRR21887643 MDR-TB lineage2.2.2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR7236280 Other La1.8.1 None
SRR7236280 Other La1.8.1 None
SRR1172310 MDR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR1462581 Sensitive La2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1462580 Sensitive La2 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1049720 Sensitive lineage4.6.1.1 None
SRR1049720 Sensitive lineage4.6.1.1 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02381035 Sensitive lineage4.6.1.1 None
SAMN02381035 Sensitive lineage4.6.1.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816387 Sensitive lineage4.9 None
ERR4816387 Sensitive lineage4.9 None
SRR1792083 Other La1.8.1 None
SRR1792083 Other La1.8.1 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1462579 Sensitive La2 None
SRR17832802 HR-TB lineage3 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR7902672 Sensitive lineage1.1.3.1 None
ERR7902672 Sensitive lineage1.1.3.1 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816551 MDR-TB lineage4.1.1.3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR4820053 Sensitive lineage4.9 None
ERR4820053 Sensitive lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3148178 MDR-TB lineage4.3.3 mx
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR25515401 MDR-TB lineage2.2.2 None
ERR987722 MDR-TB None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11662424 MDR-TB lineage1.1.1.1 None
SRR11662424 MDR-TB lineage1.1.1.1 None
ERR2516511 MDR-TB lineage2.2.1 pe
ERR2516511 MDR-TB lineage2.2.1 pe
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797089 Pre-XDR-TB lineage1.1.3.1;lineage4.3.3 in
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None