EBG00000313325 - n.546C>T
Drug resistance types
108 Sensitive
10 RR-TB
8 HR-TB
11 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 54 |
| lineage2.2.1 | 10 |
| lineage4 | 1 |
| lineage4.6.1.1 | 9 |
| lineage4.6.1.2 | 3 |
| lineage6.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage6.2.1 | 2 |
| lineage4.4.1.1 | 5 |
| lineage5.1.1 | 6 |
| lineage4.1.2 | 5 |
| lineage4.2.1.1 | 2 |
| lineage3 | 5 |
| lineage4.3.4.1;lineage4.9 | 1 |
| La1.2.BCG | 4 |
| lineage2.2.1.1 | 2 |
| lineage4.6 | 2 |
| lineage4.8 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3.1;lineage4 | 1 |
| lineage4.3.3 | 5 |
| lineage1.1.2 | 3 |
| lineage2.2.1.2 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage6.2.3 | 1 |
| lineage5.1.4 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.9.1 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1 | 2 |
| lineage3.1.3 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.2.1.2 | 2 |
| La1.7;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage5.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 154 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7443735 | Sensitive | lineage4.9 | None | ERR1140771 | Sensitive | lineage2.2.1 | None | SRR7443769 | Sensitive | lineage4 | None | SRR7443731 | Sensitive | lineage4.9 | None | SRR7444084 | Sensitive | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1.1 | None | SRR1140586 | Sensitive | lineage4.9 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | ERR1140786 | Sensitive | lineage6.1.1 | None | SRR7443739 | Sensitive | lineage4.9 | None | SRR7443768 | Sensitive | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SRR7443725 | Sensitive | lineage4.9 | None | SRR7443785 | Sensitive | lineage4.9 | None | SRR1140677 | MDR-TB | lineage4.6.1.1 | None | ERR1140790 | Sensitive | lineage2.2.1 | None | ERR1140776 | Sensitive | lineage6.2.1 | None | SRR7443763 | Sensitive | lineage4.9 | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | ERR1140774 | Sensitive | lineage5.1.1 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7443791 | Sensitive | lineage4.9 | None | ERR751338 | Other | lineage5.1.1 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | ERR1140780 | Sensitive | lineage4.2.1.1 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7443754 | Sensitive | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR7086711 | HR-TB | La1.2.BCG | None | SRR7443734 | Sensitive | lineage4.9 | None | SRR7444102 | Sensitive | lineage4.9 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | ERR405217 | Sensitive | lineage2.2.1 | None | SRR7443761 | Sensitive | lineage4.9 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | SRR7131053 | Other | lineage2.2.1 | None | ERR2510807 | Sensitive | lineage4.6 | None | SRR7535080 | Sensitive | lineage4.8 | None | ERR1140789 | Sensitive | lineage1.1.1.1 | None | ERR405222 | Sensitive | lineage3.1;lineage4 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062895 | Sensitive | lineage4.6.1.1 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | SRR7443730 | Sensitive | lineage4.9 | None | SRR7131122 | Other | lineage2.2.1 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | SRR7443732 | Sensitive | lineage4.9 | None | SRR7443765 | Sensitive | lineage4.9 | None | SRR7443751 | Sensitive | lineage4.9 | None | ERR1140766 | Sensitive | lineage1.1.2 | None | SRR1049735 | Sensitive | lineage4.9 | None | SRR7443740 | Sensitive | lineage4.9 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | ERR1034791 | RR-TB | lineage4.9 | None | ERR1140799 | Sensitive | lineage4.2.1.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR1168955 | Sensitive | lineage4.2;lineage4.9 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR1140778 | Sensitive | lineage5.1.4 | None | SRR7443741 | Sensitive | lineage4.9 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR1140627 | Sensitive | lineage4.6.1.1 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | SRR11972163 | Sensitive | lineage1.1.2 | None | SRR7443743 | Sensitive | lineage4.9 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | SRR7443753 | Sensitive | lineage4.9 | None | SRR638895 | Sensitive | lineage4.9 | None | SRR11972164 | HR-TB | lineage2.2.1.1 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR1140796 | Sensitive | lineage4.6.2.2 | None | SRR1049743 | Sensitive | lineage4.6.1.1 | None | ERR1140767 | Sensitive | lineage6.1.1 | None | ERR1140794 | Sensitive | lineage5.1.1 | None | ERR1140785 | Sensitive | lineage1.1.2 | None | ERR1140775 | Sensitive | lineage5.1.1 | None | SRR1062869 | Sensitive | lineage4.9.1 | None | SRR7443722 | Sensitive | lineage4.9 | None | ERR1140783 | Sensitive | lineage2.2.2 | None | ERR1140762 | Sensitive | lineage3.1 | None | ERR1140793 | Sensitive | lineage5.1.1 | None | ERR1140795 | Sensitive | lineage6.2.1 | None | ERR1140798 | Sensitive | lineage3.1.3 | None | ERR4829202 | Sensitive | lineage3 | None | ERR1140777 | Sensitive | lineage4.6.2.2 | None | ERR1140787 | Sensitive | lineage4.3.3 | None | SRR7443738 | Sensitive | lineage4.9 | None | SRR1062898 | MDR-TB | lineage4.3.4.2.1 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | SRR7444098 | Sensitive | lineage4.9 | None | ERR1140791 | Sensitive | lineage1.2.1.2 | None | SAMN02381047 | Sensitive | lineage4.6.1.1 | None | ERR1140768 | Sensitive | lineage4.3.3 | None | SRR7443748 | Sensitive | lineage4.9 | None | SRR7443767 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR7443747 | Sensitive | lineage4.9 | None | SRR7444103 | Sensitive | lineage4.9 | None | SRR11972159 | HR-TB | lineage2.2.1 | None | SRR7131156 | Sensitive | lineage4.6 | None | SRR7443724 | Sensitive | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR970448 | RR-TB | lineage4.1.1.3 | None | ERR1140792 | HR-TB | lineage5.1 | None | SRR7444071 | Sensitive | lineage4.9 | None | ERR970455 | RR-TB | lineage4.1.2 | None | SRR7443790 | Sensitive | lineage4.9 | None | SRR7443794 | Sensitive | lineage4.9 | None | ERR1140797 | Sensitive | lineage5.1.4 | None | ERR245790 | Sensitive | lineage4.3.4.2.1 | None | SAMN02381005 | Sensitive | lineage4.6.1.1 | None | SRR7443736 | Sensitive | lineage4.9 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR7443757 | Sensitive | lineage4.9 | None | ERR1140772 | Sensitive | lineage1.2.1.2 | None | ERR1140784 | Sensitive | lineage3 | None | ERR4829196 | Other | lineage4.1.2 | None | SRR7443762 | Sensitive | lineage4.9 | None | SRR7444072 | Sensitive | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SRR7086718 | HR-TB | La1.2.BCG | None | SAMN02381037 | MDR-TB | lineage4.6.1.1 | None | SRR7086716 | HR-TB | La1.2.BCG | None | SRR7086717 | Other | La1.2.BCG | None | SRR7443733 | Sensitive | lineage4.9 | None | ERR1140779 | Sensitive | lineage3.1.3 | None | SRR1057937 | Sensitive | lineage4.9 | None | ERR473279 | Other | lineage4.9 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR7443750 | Sensitive | lineage4.9 | None | ERR1140781 | Sensitive | lineage3.1 | None | SRR7443752 | Sensitive | lineage4.9 | None | SRR7443737 | Sensitive | lineage4.9 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR7443726 | Sensitive | lineage4.9 | None | ERR1140782 | Sensitive | lineage2.1 | None | SRR3105762 | Sensitive | lineage4.1 | None | ERR970453 | RR-TB | lineage4.1.2 | None | SRR7443749 | Sensitive | lineage4.9 | None |
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