EBG00000313325 - n.546C>T


Drug resistance types
63 Sensitive 15 RR-TB 18 HR-TB 34 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 46 Other
lineage Counts
lineage Count
lineage4.7 1
lineage4.6.1.1 6
lineage4.4.1.1 8
La1.8.1 3
lineage4.6.1 12
lineage3 6
lineage4.8 8
lineage4.9 36
lineage2.2.1 16
9
lineage4.3.3 9
lineage4.1.2 4
lineage4.1.2.1 9
lineage4.2.1 2
lineage3.1.1 1
lineage4.3.4.2.1 5
lineage4.3.1 1
lineage2.2.1.2 1
lineage4.6 2
lineage4.6.1.2 5
lineage4 5
lineage4.3.4.1 1
lineage4.2.2.1 1
lineage4.9;La1.8.1 1
lineage4;lineage3.1 1
La1.7.1 1
lineage1.1.2 2
lineage4.3.4.2 2
lineage4.6.4 1
lineage5.1.1 2
lineage4.1.1.3 4
lineage2.2 4
lineage2.2.1.1 3
lineage4.9;lineage2.2.1 2
lineage3.1.2.1 3
lineage4.9;lineage4.2.1 1
lineage4.6.1;lineage3.1 1
lineage1.1.3.1 1
lineage1 1
lineage2.2.2 1
lineage1.2.2.2 2
lineage4.1.1 1
lineage1.1.3.2 1
spoligotype Counts
spoligotype Count
None 186
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4820819 Sensitive lineage4.7 gb
ERR4821879 Other lineage4.6.1.1 None
ERR1873459 Pre-XDR-TB lineage4.4.1.1 None
SRR5382721 Other La1.8.1 None
SAMN02381047 Sensitive lineage4.6.1 None
SRR5431794 Other La1.8.1 None
ERR4829202 Sensitive lineage3 None
ERR4821167 Other lineage4.8 gb
SRR6046152 Other lineage4.9 None
SRR6044883 Sensitive lineage2.2.1 gb
SRR6045162 Sensitive lineage4.9 None
SRR6045379 Other None
ERR4822049 Sensitive lineage4.3.3 None
ERR4829196 Other lineage4.1.2 None
ERR4830705 Sensitive lineage4.1.2.1 dz
ERR4829634 Sensitive lineage4.3.3 it
ERR4829710 MDR-TB lineage4.2.1 it
ERR502942 Sensitive lineage4.9 None
SRR6046766 Other lineage3.1.1 None
SRR6785282 Other lineage4.3.3 None
SRR6896534 Sensitive None
ERR4829010 MDR-TB lineage2.2.1 it
ERR3078008 MDR-TB lineage4.6.1 None
ERR1199062 Sensitive lineage4.6.1.1 ug
ERR4872269 XDR-TB lineage2.2.1 None
SRR6855896 Other lineage4.3.4.2.1 None
ERR323035 Sensitive lineage4.9 None
SRR7131035 Sensitive lineage4.8 None
SRR7131018 Sensitive lineage4.3.1 None
SRR7131053 Other lineage2.2.1 None
SRR7453031 Sensitive lineage2.2.1.2 None
SRR7131121 Other lineage4.3.3 None
SRR7131156 Other lineage4.6 None
SRR7131296 Other lineage4.3.3 None
SRR7131114 Other lineage4.1.2 None
SRR7131122 Other lineage2.2.1 None
SRR7131129 Sensitive lineage4.1.2.1 None
SRR7131160 Sensitive lineage3 None
SRR7131169 Other lineage4.1.2.1 None
SRR7131240 Sensitive lineage4.8 None
SRR7535074 Sensitive lineage3 None
SRR7535054 Sensitive lineage4.6.1 None
SRR7535053 Sensitive lineage3 None
ERR3283015 Sensitive lineage4.9 None
SRR7535077 MDR-TB lineage4.6.1.2 None
SRR7535079 Sensitive lineage4.6.1.1 None
SRR7645936 Sensitive lineage2.2.1 None
SRR7755706 MDR-TB lineage4.2.1 None
ERR323057 Sensitive lineage4.9 None
ERR10796627 Other lineage4 None
SRR7535080 HR-TB lineage4.8 None
SRR8600288 Other La1.8.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796625 RR-TB lineage4.4.1.1 None
ERR10796630 HR-TB None
ERR405191 Other lineage4.9 None
ERR3283034 Sensitive lineage4.9 None
ERR4407557 Pre-XDR-TB lineage4.2.2.1 None
ERR405190 Sensitive lineage4.9 None
ERR405217 Sensitive lineage2.2.1 None
ERR405209 Sensitive lineage4 None
ERR4188072 Other lineage4.9;La1.8.1 None
ERR405222 Sensitive lineage4;lineage3.1 None
ERR4450934 Other La1.7.1 None
ERR473279 Other lineage4.9 None
ERR473311 Sensitive lineage4.9 None
ERR5979784 Sensitive lineage4.9 None
ERR5908213 Sensitive lineage4.3.3 None
ERR5908229 Sensitive lineage4.3.3 None
ERR473340 Sensitive lineage1.1.2 None
ERR5979787 Other lineage4.9 None
ERR6197043 MDR-TB lineage4.3.4.2 None
ERR736850 Sensitive lineage4.9 None
ERR702437 HR-TB lineage4.6.4 None
ERR6359073 Sensitive lineage4.9 None
ERR736825 Sensitive lineage4.9 None
ERR751330 MDR-TB lineage5.1.1 None
ERR751317 Sensitive lineage4.9 None
ERR751338 Other lineage5.1.1 None
ERR773806 Sensitive lineage2.2.1 None
ERR773804 Sensitive lineage4.9 None
ERR9119098 Sensitive lineage4.3.3 None
ERR970448 RR-TB lineage4.1.1.3 None
ERR970453 RR-TB lineage4.1.2 None
SRR1013528 Pre-XDR-TB lineage2.2 None
ERR970457 RR-TB lineage4.1.1.3 None
ERR970455 RR-TB lineage4.1.2 None
ERR972801 RR-TB lineage2.2.1.1 None
SRR1013610 HR-TB lineage4 None
SRR1013530 HR-TB lineage4.9 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013609 HR-TB lineage4 None
SRR1049622 MDR-TB lineage4.4.1.1 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1049623 MDR-TB lineage4.4.1.1 None
SRR1049723 MDR-TB lineage4.6.1 None
SRR1049630 MDR-TB lineage4.4.1.1 None
SRR1049751 RR-TB lineage4.6.1.2 None
SRR1049724 MDR-TB lineage4.6.1 None
SRR1049743 Sensitive lineage4.6.1 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1049752 RR-TB lineage4.6.1.2 None
SRR1062868 HR-TB lineage4.9 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062869 Pre-XDR-TB lineage4.9 None
SRR1062895 Other lineage4.6.1.1 None
SRR1106670 Other lineage4.9 None
SRR1062898 MDR-TB lineage4.3.4.2.1 None
SRR1062933 Sensitive lineage4.9 None
SRR1062927 MDR-TB lineage4.6.1 None
SRR1062937 HR-TB lineage4.6.1 None
SRR1140586 HR-TB lineage4.9 None
SRR1140740 RR-TB lineage4.6.1.2 None
SRR1140627 Other lineage4.6.1 None
SRR1140677 MDR-TB lineage4.6.1 None
SRR1140723 Sensitive lineage4.6.1.1 None
SRR1140751 MDR-TB lineage4.4.1.1 None
SRR1140750 MDR-TB lineage4.3.4.2.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173310 MDR-TB None
SRR1141261 MDR-TB lineage4.9 None
SRR1166181 MDR-TB lineage4 None
SRR1172751 HR-TB lineage3.1.2.1 None
SRR1173190 Sensitive lineage4.9 None
SRR1173269 Sensitive lineage4.9 None
SRR1168955 MDR-TB lineage4.9;lineage4.2.1 None
SRR1173139 Sensitive lineage4.9 None
SRR1173508 Sensitive lineage4.9 None
SRR1173343 Pre-XDR-TB lineage2.2.1 None
SRR1173705 Other lineage4.9 None
SRR1175173 HR-TB lineage3.1.2.1 None
SRR1173832 MDR-TB lineage4.6.1;lineage3.1 None
SRR1173768 Sensitive lineage4.9 None
SRR1173865 Sensitive lineage4.9 None
SRR11972157 MDR-TB lineage2.2.1 None
SRR11972169 HR-TB lineage2.2 None
SRR11972159 MDR-TB lineage2.2.1 None
SRR11972166 Sensitive lineage1.1.3.1 None
SRR11972164 MDR-TB lineage2.2.1.1 None
SRR11972165 MDR-TB lineage2.2.1.1 None
SRR11972163 Sensitive lineage1 None
SRR11972170 HR-TB lineage3 None
SRR11972171 RR-TB lineage2.2.2 None
SRR13591377 Sensitive lineage4.1.1.3 None
ERR4815278 Other lineage4.8 None
SRR15368973 Other None
SRR13861506 RR-TB lineage4.9 None
SRR14088382 MDR-TB lineage3 None
SRR15315871 Sensitive lineage4.9 None
SRR22048375 Other lineage4.1.2.1 None
SAMN02381005 Other lineage4.6.1.1 None
SAMN02381009 MDR-TB lineage4.4.1.1 None
SRR3105762 HR-TB None
ERR4816928 HR-TB lineage1.2.2.2 None
SAMN02381037 MDR-TB lineage4.6.1 None
ERR4816429 Other lineage1.1.2 None
ERR192070 Other None
ERR4815944 HR-TB lineage4.1.2.1 None
ERR2027233 RR-TB lineage4.1.2.1 None
ERR4816238 Sensitive lineage4.1.1 None
SAMN02381051 RR-TB lineage4.6.1.2 None
ERR2124088 Other lineage4.4.1.1 None
ERR2124090 MDR-TB lineage2.2.1 None
ERR2124092 HR-TB lineage1.2.2.2 None
ERR2124091 Pre-XDR-TB lineage4.3.4.2 None
ERR2510736 Other lineage4.1.2.1 None
ERR2145516 Sensitive lineage2.2.1 None
ERR1034791 RR-TB None
ERR4816755 Other lineage4.1.1.3 None
SAMN02599156 HR-TB lineage3.1.2.1 None
SRR3742667 Sensitive lineage4.9 None
ERR4816718 Other lineage4.1.2.1 gb
ERR245790 Sensitive None
ERR2510746 Other lineage2.2.1 None
ERR2510807 Other lineage4.6 None
ERR2510820 Other lineage4.8 None
ERR2510831 Other lineage4.3.3 None
ERR2510813 Sensitive lineage4.8 None
ERR1873445 MDR-TB lineage2.2.1 None
ERR4819324 Other lineage4.8 gb
ERR1199065 Sensitive lineage4.6.1 None
ERR1873557 Pre-XDR-TB lineage2.2.1 None
ERR4819602 Sensitive lineage4.9 None
ERR4819867 Other lineage1.1.3.2 None