EBG00000313339 - n.1017A>C
Drug resistance types
8 Sensitive
4 RR-TB
13 HR-TB
10 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 1 |
| lineage4.5 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1 | 24 |
| lineage2.2.1.1 | 2 |
| lineage2.2 | 1 |
| lineage4.4.2 | 2 |
| lineage2.2.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.8 | 8 |
| lineage4.3.4.2 | 4 |
| lineage3.1.3 | 1 |
| lineage3 | 5 |
| lineage4.4.1.1 | 1 |
| lineage6.1.1 | 1 |
| lineage4.9 | 6 |
| lineage4 | 9 |
| 4 | |
| lineage4;lineage2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.2.1 | 7 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.4 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8.1 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16058218 | MDR-TB | lineage4.3.4.1 | None | SRR11972215 | RR-TB | lineage4.5 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR16058205 | HR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003036 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18913779 | Other | lineage3 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19303899 | Other | lineage3 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675282 | Other | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2027232 | Other | lineage4.3.4.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5007172 | Sensitive | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR6045621 | Other | lineage4.1.1.3 | None | ERR4819720 | Other | lineage3.1.2.1 | gb | SRR6045553 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6044838 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6044787 | Other | lineage4.4 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045999 | Sensitive | lineage4.8.2 | gb | SRR6045952 | HR-TB | None | SRR6044896 | Other | lineage4.8 | gb | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045022 | Other | lineage3.1.1 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR7131075 | Other | lineage4.8 | None | SRR6046482 | HR-TB | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR10796592 | Other | lineage4 | None | ERR10796568 | Other | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR6197036 | Other | lineage4 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10315709 | MDR-TB | lineage2.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11462861 | Other | La1.8.1 | None |
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