EBG00000313339 - n.1462C>T


Drug resistance types
5 Sensitive 16 RR-TB 2 HR-TB 24 MDR-TB 8 Pre-XDR-TB 1 XDR-TB 18 Other
lineage Counts
lineage Count
lineage2.2 2
4
lineage2.2.1 16
lineage4 3
lineage1.1.1 1
lineage4.1.2.1 2
lineage4.9 14
lineage3 4
lineage4.2.1 3
lineage5.1.1 2
La1.8.1 3
lineage4.7 2
lineage4.1.1.3 2
lineage4.8 1
lineage4.4.1.2 1
lineage6.2.3;lineage1.1.2 1
La1.7.X-unk4 1
lineage4.1.2 1
lineage4.3.2 1
lineage2.2.2 1
lineage1.1.2 1
lineage4.8;lineage4.3.3 4
lineage4.3.3 1
lineage4.6.5 1
lineage4.3.2.1 1
lineage4.4 1
spoligotype Counts
spoligotype Count
None 74
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3601585 Pre-XDR-TB lineage2.2 None
ERR4815310 Other None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage4 None
ERR4817554 Other lineage1.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817915 RR-TB lineage4.9 None
SRR6046376 Other lineage3 None
SRR5153076 Sensitive lineage2.2.1 None
ERR1023509 Other None
SRR6046839 Other lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR502517 MDR-TB lineage5.1.1 None
ERR5087846 Other La1.8.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR6896339 MDR-TB lineage2.2.1 None
ERR5311077 RR-TB La1.8.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9971122 MDR-TB lineage4.8 None
ERR017781 Other lineage3 None
ERR036207 Other lineage4.9 None
ERR019855 Other lineage3 None
ERR10796589 Other lineage4.9 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3468488 RR-TB La1.8.1 None
ERR3445487 Other La1.7.X-unk4 None
ERR3588246 Other lineage4.1.2 None
ERR4769554 RR-TB lineage4.9 None
ERR3957939 Sensitive lineage4.3.2 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4800222 Sensitive lineage1.1.2 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR5864958 MDR-TB lineage2.2.1 None
ERR751345 Other lineage5.1.1 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR1049676 MDR-TB lineage4.8;lineage4.3.3 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR7801175 RR-TB lineage4.6.5 None
ERR987707 MDR-TB lineage4.7 None
SRR1062920 MDR-TB lineage4.8;lineage4.3.3 None
SRR1049677 MDR-TB lineage4.8;lineage4.3.3 None
SRR1140574 MDR-TB lineage4.8;lineage4.3.3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1173281 RR-TB lineage3 None
SRR1173185 HR-TB lineage4.9 None
SRR1173740 Other None
SRR1173450 RR-TB lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175473 Other lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR16156832 RR-TB None
SRR1184329 MDR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR11972447 Pre-XDR-TB lineage2.2.1 None
SRR1196478 MDR-TB lineage4.9 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16627752 RR-TB lineage4.4 None
SRR19304018 Sensitive lineage4.2.1 None
SRR2101312 MDR-TB lineage2.2.1 None