EBG00000313339 - n.1462C>T
Drug resistance types
6 Sensitive
16 RR-TB
2 HR-TB
24 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 14 |
| lineage4 | 3 |
| lineage2.2.1 | 16 |
| 4 | |
| lineage4.2.1 | 3 |
| lineage4.4 | 1 |
| lineage2.2 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.8 | 2 |
| lineage3.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage3 | 4 |
| La1.8.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage5.1.1 | 2 |
| lineage4.7 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.6.5 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972447 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR19304018 | Sensitive | lineage4.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815310 | Other | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229325 | Other | lineage4.8 | dk | ERR4815550 | Other | lineage4 | None | ERR2245407 | Sensitive | lineage3.1.1 | no | ERR4817915 | RR-TB | lineage4.9 | None | SRR5153076 | Sensitive | lineage2.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR1023509 | Other | None | SRR7645899 | RR-TB | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR017781 | Other | lineage3 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR019855 | Other | lineage3 | None | ERR036207 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10796589 | Other | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR3588246 | Other | lineage4.1.2 | None | ERR3957939 | Sensitive | lineage4.3.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4800222 | Sensitive | lineage1.1.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5864958 | MDR-TB | lineage2.2.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR751345 | Other | lineage5.1.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173740 | Other | None |
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