EBG00000313339 - n.1893A>C
Drug resistance types
43 Sensitive
8 RR-TB
6 HR-TB
15 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4;lineage2.2.1 | 1 |
| lineage4.8 | 5 |
| lineage3 | 4 |
| lineage5.1.1 | 1 |
| lineage4.9 | 31 |
| La1.8.1 | 3 |
| lineage6.1.1 | 1 |
| lineage2.2.1 | 9 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.4 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4 | 5 |
| lineage4;lineage3.1 | 1 |
| lineage1.1.2 | 1 |
| La1.2 | 1 |
| lineage4.9;La1.8 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage4.6.1.1 | 8 |
| 3 | |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1;lineage3.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.1.3.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.6.1 | 2 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982075 | Sensitive | lineage3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502942 | Sensitive | lineage4.9 | None | ERR5162118 | Other | La1.8.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131238 | Sensitive | lineage6.1.1 | None | SRR7131122 | Other | lineage2.2.1 | None | ERR3468754 | Sensitive | lineage4.9 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | ERR1144989 | Sensitive | lineage4.8 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | ERR019572 | HR-TB | lineage2.2.1 | ru | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR5979787 | Other | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR4772206 | Other | La1.2 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR751414 | MDR-TB | lineage4 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR970455 | RR-TB | lineage4.1.2 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | SRR1173310 | MDR-TB | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR1791940 | Other | La1.8.1 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR2229554 | Other | lineage4.8 | None | SAMN02567670 | Sensitive | lineage4.6.1.1 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034791 | RR-TB | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR1199021 | Other | lineage4.6.1.1 | None | ERR1199009 | Sensitive | lineage4.6.1.1 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | ERR245790 | Sensitive | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR6044993 | Other | lineage3 | None | SRR6046152 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6045110 | Other | lineage3 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046766 | Other | lineage3.1.1 | None | ERR502482 | Sensitive | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR502498 | Sensitive | lineage4.9 | None |
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